RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 WDR5P61964 334 aaKnown RBP12.08□□□□□ -0.47
RETREG3-201ENST00000309428 TBPL1P62380 186 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 ZXDCQ2QGD7 858 aaPredicted RBP12.08□□□□□ -0.47
RETREG3-201ENST00000309428 COX20Q5RI15 118 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 GPR149Q86SP6 731 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 FAM129CQ86XR2 697 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 PEX5LQ8IYB4 626 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 ZNF431Q8TF32 576 aaPredicted RBP12.08□□□□□ -0.47
RETREG3-201ENST00000309428 C2orf15Q8WU43 125 aaKnown RBP12.08□□□□□ -0.47
RETREG3-201ENST00000309428 KCTD7Q96MP8 289 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 SPHK2Q9NRA0 654 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 MRPL15Q9P015 296 aaKnown RBP12.08□□□□□ -0.47
RETREG3-201ENST00000309428 CLEC2DQ9UHP7 191 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 POFUT2Q9Y2G5 429 aa12.08□□□□□ -0.47
RETREG3-201ENST00000309428 LOC105369274A0A096LPK9 316 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 ANKRD28O15084 1053 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 KMOO15229 486 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 AKR7A2O43488 359 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF613Q6PF04 617 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 OR4N4Q8N0Y3 316 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 OR5AR1Q8NGP9 310 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 F2RL3Q96RI0 385 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 DOK1Q99704 481 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 NIPSNAP1Q9BPW8 284 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 PRR14Q9BWN1 585 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
RETREG3-201ENST00000309428 ABCG4Q9H172 646 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 PPIEQ9UNP9 301 aaKnown RBP12.08□□□□□ -0.48
RETREG3-201ENST00000309428 SH2B3Q9UQQ2 575 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 SNTNA6NMZ2 147 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 WNT9AO14904 365 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 ABLIM3O94929 683 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 APEX1P27695 318 aaKnown RBP12.08□□□□□ -0.48
RETREG3-201ENST00000309428 MAP2K3P46734 347 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 POU4F3Q15319 338 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 GPR33Q49SQ1 333 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 TMEM215Q68D42 235 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 RIMKLAQ8IXN7 391 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF433Q8N7K0 673 aaPredicted RBP12.08□□□□□ -0.48
RETREG3-201ENST00000309428 AP3S1Q92572 193 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 DUS3LQ96G46 650 aaKnown RBP12.08□□□□□ -0.48
RETREG3-201ENST00000309428 TXNDC15Q96J42 360 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 BBS4Q96RK4 519 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 TSSK6Q9BXA6 273 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 BRINP2Q9C0B6 783 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 SLC6A17Q9H1V8 727 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 ELAC1Q9H777 363 aaKnown RBP12.08□□□□□ -0.48
RETREG3-201ENST00000309428 BACE2Q9Y5Z0 518 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 VWA8A3KMH1 1905 aa12.08□□□□□ -0.48
RETREG3-201ENST00000309428 C2orf92A0A1B0GVN3 265 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 PLD2O14939 933 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 ENTPD6O75354 484 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 DNAJB5O75953 348 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 RETP07949 1114 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 INHBBP09529 407 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CYP2A6P11509 494 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-201ENST00000309428 MAB21L1Q13394 359 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 SYT6Q5T7P8 510 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-201ENST00000309428 TMIGD1Q6UXZ0 262 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 SUSD6Q92537 303 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 PMEPA1Q969W9 287 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 OR51V1Q9H2C8 321 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 ADAM30Q9UKF2 790 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CD8B2A6NJW9 211 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 GABRR3A8MPY1 467 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 KDM4BO94953 1096 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CYP17A1P05093 508 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CD8BP10966 210 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 SLC9A3P48764 834 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 HEPACAMQ14CZ8 416 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 TATDN3Q17R31 274 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 FBXO43Q4G163 708 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 NPAS3Q8IXF0 933 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 DPP10Q8N608 796 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 FRMD1Q8N878 549 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF557Q8N988 423 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-201ENST00000309428 VMP1Q96GC9 406 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 ZNF300Q96RE9 604 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-201ENST00000309428 KCNK12Q9HB15 430 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 ENOPH1Q9UHY7 261 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 MUTYHQ9UIF7 546 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 FBXW2Q9UKT8 454 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CDV3Q9UKY7 258 aaKnown RBP12.07□□□□□ -0.48
RETREG3-201ENST00000309428 ERVW-1Q9UQF0 538 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 HCN4Q9Y3Q4 1203 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 FRS3O43559 492 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 OR1F1O43749 312 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 NCR1O76036 304 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 IGFBP1P08833 259 aaPredicted RBP12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CEBPBP17676 345 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CLCNKAP51800 687 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CLDN8P56748 225 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 ID2Q02363 134 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 PTGES3Q15185 160 aaKnown RBP12.07□□□□□ -0.48
RETREG3-201ENST00000309428 BCL2L15Q5TBC7 163 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 PXDC1Q5TGL8 231 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 OR2G6Q5TZ20 316 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
RETREG3-201ENST00000309428 CEACAM20Q6UY09 585 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms