RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 BBS1Q8NFJ9 593 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 OR14K1Q8NGZ2 314 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 NINJ1Q92982 152 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 SERTAD4Q9NUC0 356 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 EPHA6Q9UF33 1036 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 OR6C6A6NF89 314 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 WASHC1A8K0Z3 465 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 OR4D1Q15615 310 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 LCN10Q6JVE6 187 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 WDR37Q9Y2I8 494 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 MAGED1Q9Y5V3 778 aaPredicted RBP12.12□□□□□ -0.47
USP38-201ENST00000307017 ABCA9Q8IUA7 1624 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 PI15O43692 258 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 GJB5O95377 273 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 UCHL1P09936 223 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 TYRP14679 529 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 PFKLP17858 780 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 CAMLGP49069 296 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 ARSFP54793 590 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 RNF4P78317 190 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 FGFBP1Q14512 234 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 SCML4Q8N228 414 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 F2RL3Q96RI0 385 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 RAD9AQ99638 391 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 FUNDC2Q9BWH2 189 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 TMEM121BQ9BXQ6 578 aaPredicted RBP12.12□□□□□ -0.47
USP38-201ENST00000307017 SERINC1Q9NRX5 453 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 IGSF9Q9P2J2 1179 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 CYP8B1Q9UNU6 501 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 IGLV3-22A0A075B6J6 115 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 MT-ND5P03915 603 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 GKN3PP0CG01 181 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 DPYSL2Q16555 572 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 LPAL2Q16609 132 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 SLC5A11Q8WWX8 675 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 PLD4Q96BZ4 506 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 CMKLR1Q99788 373 aa12.12□□□□□ -0.47
USP38-201ENST00000307017 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
USP38-201ENST00000307017 F8W036 122 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 CHMP24386 653 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 OR4D2P58180 307 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 MLF1P58340 268 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 BLOC1S1P78537 153 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 SPRED3Q2MJR0 410 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 DUSP28Q4G0W2 176 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 SPIN4Q56A73 249 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 C3orf33Q6P1S2 294 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 NPAS4Q8IUM7 802 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 DCUN1D4Q92564 292 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 MKLN1Q9UL63 735 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
USP38-201ENST00000307017 PCDHGB5Q9Y5G0 923 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 ROBO3Q96MS0 1386 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 MDFIC2A0A1B0GVS7 189 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 RBM47A0AV96 593 aaKnown RBP12.11□□□□□ -0.47
USP38-201ENST00000307017 K7ERQ8 282 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 PAK4O96013 591 aaPredicted RBP12.11□□□□□ -0.47
USP38-201ENST00000307017 HK3P52790 923 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 ST3GAL3Q11203 375 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 MOGQ16653 247 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 MS4A13Q5J8X5 152 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 CDHR3Q6ZTQ4 885 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 CYB561A3Q8NBI2 242 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 THAP4Q8WY91 577 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 TFGQ92734 400 aaPredicted RBP12.11□□□□□ -0.47
USP38-201ENST00000307017 CMTM7Q96FZ5 175 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 HHIPL1Q96JK4 782 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 ZNF778Q96MU6 729 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 KCNH6Q9H252 994 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 SDHAF3Q9NRP4 125 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 AK6Q9Y3D8 172 aaKnown RBP12.11□□□□□ -0.47
USP38-201ENST00000307017 AQP12BA6NM10 295 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 PPP1R3DO95685 299 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 RD3LP0DJH9 198 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 PYCR1P32322 319 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 HCAR3P49019 387 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 ACY1Q03154 408 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 AWAT2Q6E213 333 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 SYT14Q8NB59 555 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 ACTR3BQ9P1U1 418 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 LRFN1Q9P244 771 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 DLGAP1O14490 977 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 PIGGQ5H8A4 983 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 DESI1Q6ICB0 168 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 RGMBQ6NW40 437 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 NUP43Q8NFH3 380 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 FKBP10Q96AY3 582 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 C3orf49Q96BT1 292 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 LIN37Q96GY3 246 aaPredicted RBP12.11□□□□□ -0.47
USP38-201ENST00000307017 SYT4Q9H2B2 425 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 HAO2Q9NYQ3 351 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 ANKRD66B4E2M5 251 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 SLC7A4O43246 635 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 RETP07949 1114 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 LEG1Q6P5S2 330 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 TOMM40LQ969M1 308 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 FAM234AQ9H0X4 552 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 PPP1R14DQ9NXH3 145 aa12.11□□□□□ -0.47
USP38-201ENST00000307017 CNIH4Q9P003 139 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms