RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 TYW3Q6IPR3 259 aaKnown RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 PIK3R3Q92569 461 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 GFM1Q96RP9 751 aaKnown RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 DCLRE1CQ96SD1 692 aaKnown RBP12.87□□□□□ -0.35
CTTN-201ENST00000301843 MIXL1Q9H2W2 232 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 TMEM39AQ9NV64 488 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 TRPC4Q9UBN4 977 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 REV1Q9UBZ9 1251 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 ANGPT4Q9Y264 503 aa12.87□□□□□ -0.35
CTTN-201ENST00000301843 SCN2AQ99250 2005 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 NPIPB8E9PQR5 432 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 MYL12BO14950 172 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 SCAMP1O15126 338 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 ATG13O75143 517 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 SOD2P04179 222 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 SCG5P05408 212 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 CD72P21854 359 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 ELAVL4P26378 380 aaKnown RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 APEX1P27695 318 aaKnown RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 RNF144AP50876 292 aaPredicted RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 EIF4HQ15056 248 aaKnown RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 ZNF770Q6IQ21 691 aaPredicted RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 ACSM5Q6NUN0 579 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 OXR1Q8N573 874 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 ASCC1Q8N9N2 400 aaKnown RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 KLHL6Q8WZ60 621 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 OTULINQ96BN8 352 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 BHLHE41Q9C0J9 482 aaPredicted RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 FABP12A6NFH5 140 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 CPNE3O75131 537 aaKnown RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 C1orf105O95561 183 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 TSPAN19P0C672 248 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 CTSAP10619 480 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 TIMP2P16035 220 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 RHCEP18577 417 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 LIMS1P48059 325 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 RORCP51449 518 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 MESP2Q0VG99 397 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 DCST1Q5T197 706 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 LHFPL3Q86UP9 236 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 PHC2Q8IXK0 858 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 CADM2Q8N3J6 435 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 OR56A3Q8NH54 315 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 BTN2A2Q8WVV5 523 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 KLK6Q92876 244 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 GLYATL1Q969I3 302 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 ARSGQ96EG1 525 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 LRR1Q96L50 414 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 FOPNLQ96NB1 174 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 NLNQ9BYT8 704 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 EGLN3Q9H6Z9 239 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 THSD1Q9NS62 852 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 SPG21Q9NZD8 308 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 CRNNQ9UBG3 495 aaPredicted RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 DYRK1BQ9Y463 629 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 CAPN5O15484 640 aaPredicted RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 ELFN1P0C7U0 828 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 ARAFP10398 606 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 PSPHP78330 225 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 LARS2Q15031 903 aaKnown RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 ADGRF3Q8IZF5 1079 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 ATP6V1C2Q8NEY4 427 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTTN-201ENST00000301843 TMEM80Q96HE8 168 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 CITED4Q96RK1 184 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 YME1L1Q96TA2 773 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 SRRQ9GZT4 340 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 BRF2Q9HAW0 419 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 TXNL4BQ9NX01 149 aaKnown RBP12.86□□□□□ -0.35
CTTN-201ENST00000301843 HS3ST2Q9Y278 367 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 TMEM98Q9Y2Y6 226 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 WNT6Q9Y6F9 365 aa12.86□□□□□ -0.35
CTTN-201ENST00000301843 SLC28A2O43868 658 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 OLFM2O95897 454 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 CSF3P09919 207 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 MSL3P1P0C860 447 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 OR12D1P0DN82 309 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 TIE1P35590 1138 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 PCBP3P57721 371 aaKnown RBP12.85□□□□□ -0.35
CTTN-201ENST00000301843 FCHO2Q0JRZ9 810 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 ZNF750Q32MQ0 723 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 TIMM50Q3ZCQ8 353 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 FAM71E1Q6IPT2 247 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 REEP3Q6NUK4 255 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 OR5AR1Q8NGP9 310 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 ART5Q96L15 291 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 MAPKAP1Q9BPZ7 522 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 PLA2G12AQ9BZM1 189 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 CUEDC1Q9NWM3 386 aaPredicted RBP12.85□□□□□ -0.35
CTTN-201ENST00000301843 ATP6V1HQ9UI12 483 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 LSM2Q9Y333 95 aaKnown RBP12.85□□□□□ -0.35
CTTN-201ENST00000301843 CMAHPQ9Y471 501 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 ATG2BQ96BY7 2078 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 SLC16A5O15375 505 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 CXCL10P02778 98 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 C1GALT1C1LP0DN25 315 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 TYRP14679 529 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 VIPR1P32241 457 aa12.85□□□□□ -0.35
CTTN-201ENST00000301843 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms