RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 NKPD1Q17RQ9 610 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 BTBD16Q32M84 506 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 ACSM3Q53FZ2 586 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 PAN3Q58A45 887 aaKnown RBP13.79□□□□□ -0.2
SPRED1-201ENST00000299084 NYAP1Q6ZVC0 841 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 IL4I1Q96RQ9 567 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 TMEM246Q9BRR3 403 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 ENKD1Q9H0I2 346 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 PLEKHM1Q9Y4G2 1056 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 CNTRLQ7Z7A1 2325 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 UGT1A4P22310 534 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 SOX9P48436 509 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 ADGRE1Q14246 886 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 ARHGAP19Q14CB8 494 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 TRAM1Q15629 374 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 COL28A1Q2UY09 1125 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 OR5K1Q8NHB7 308 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 HSPB11Q9Y547 144 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 CEP170BQ9Y4F5 1589 aaPredicted RBP13.79□□□□□ -0.2
SPRED1-201ENST00000299084 CLIC1O00299 241 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 NKX6-1P78426 367 aaPredicted RBP13.79□□□□□ -0.2
SPRED1-201ENST00000299084 OGDHQ02218 1023 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 ZNF695Q8IW36 515 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 SLC5A8Q8N695 610 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 PYCR2Q96C36 320 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 RBM24Q9BX46 236 aaKnown RBP13.79□□□□□ -0.2
SPRED1-201ENST00000299084 ACTRT3Q9BYD9 372 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 UBQLN2Q9UHD9 624 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 RPH3ALQ9UNE2 315 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 ADH7P40394 386 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 ALDH3B2P48448 385 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 TAS2R39P59534 338 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 HES1Q14469 280 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 ZNF829Q3KNS6 432 aaPredicted RBP13.79□□□□□ -0.2
SPRED1-201ENST00000299084 APOBEC3HQ6NTF7 200 aaKnown RBP13.79□□□□□ -0.2
SPRED1-201ENST00000299084 SLC35F5Q8WV83 523 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 UCN3Q969E3 161 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 THOC3Q96J01 351 aaKnown RBP13.79□□□□□ -0.2
SPRED1-201ENST00000299084 SFXN2Q96NB2 322 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 NFATC4Q14934 902 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 LCLAT1Q6UWP7 414 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 NRROSQ86YC3 692 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 OR56A3Q8NH54 315 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 COQ3Q9NZJ6 369 aa13.79□□□□□ -0.2
SPRED1-201ENST00000299084 SMIM30A4D0T7 59 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 NMBRP28336 390 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 ART1P52961 327 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 MTPNP58546 118 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 ANKDD1AQ495B1 522 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 ZNF529Q6P280 563 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 USP51Q70EK9 711 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 UEVLDQ8IX04 471 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 SLC44A1Q8WWI5 657 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 RHBDF1Q96CC6 855 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 TTTY10Q9BZA0 68 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 OR51I1Q9H343 314 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 A8MVM7 634 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 IGFBP1P08833 259 aaPredicted RBP13.78□□□□□ -0.2
SPRED1-201ENST00000299084 THBS3P49746 956 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 CHRNEQ04844 493 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 CHRNA6Q15825 494 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 FRG2Q64ET8 278 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.78□□□□□ -0.25e-6■■■■■ 81.8
SPRED1-201ENST00000299084 TCEAL4Q96EI5 215 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 WDR92Q96MX6 357 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 FRG2BQ96QU4 278 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 ZNF705GA8MUZ8 300 aaPredicted RBP13.78□□□□□ -0.2
SPRED1-201ENST00000299084 A8MV72 311 aaPredicted RBP13.78□□□□□ -0.2
SPRED1-201ENST00000299084 MT-ND2P03891 347 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 RAP2AP10114 183 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 SLC2A5P22732 501 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 AWAT2Q6E213 333 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 OR7G2Q8NG99 324 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 C12orf65Q9H3J6 166 aaKnown RBP13.78□□□□□ -0.2
SPRED1-201ENST00000299084 CDH22Q9UJ99 828 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 FBXW11Q9UKB1 542 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 LRIT3Q3SXY7 679 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 OR5B17Q8NGF7 314 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 OBP2BQ9NPH6 170 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 SMCO4Q9NRQ5 59 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 DNAJC27Q9NZQ0 273 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 TMED5Q9Y3A6 229 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 TSPAN6O43657 245 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 TP53P04637 393 aaPredicted RBP13.78□□□□□ -0.2
SPRED1-201ENST00000299084 BPGMP07738 259 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 TMEM225BP0DP42 221 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 RABIFP47224 123 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 NOMO3P69849 1222 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 ZNF45Q02386 682 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 NOMO1Q15155 1222 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 GALNT12Q8IXK2 581 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 CUTCQ9NTM9 273 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 GLOD5A6NK44 160 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 MTX2O75431 263 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 LCATP04180 440 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 HLA-EP13747 358 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 LSSP48449 732 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 F2RL1P55085 397 aa13.78□□□□□ -0.2
SPRED1-201ENST00000299084 OR52W1Q6IF63 320 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms