RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PCDH1Q08174 1060 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 BAK1Q16611 211 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 KLHDC8AQ8IYD2 350 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 PLA2G15Q8NCC3 412 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 IL17RDQ8NFM7 739 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 ZNF296Q8WUU4 475 aaPredicted RBP23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 POLR2J2Q9GZM3 115 aaKnown RBP23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 POLR2J3Q9H1A7 115 aaKnown RBP23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 SMURF1Q9HCE7 757 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 SLC23A2Q9UGH3 650 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 CFL2Q9Y281 166 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 PLXNA2O75051 1894 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 PRAMEF27A3QJZ7 478 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 PDZK1P1A8MUH7 402 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 OSMP13725 252 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 SPHARQ15513 63 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 CCDC149Q6ZUS6 474 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 APOBEC4Q8WW27 367 aaKnown RBP23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 TM4SF18Q96CE8 201 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 PDXPQ96GD0 296 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 DMRTB1Q96MA1 342 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 TRNT1Q96Q11 434 aaKnown RBP23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 TAPBPLQ9BX59 468 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 TP63Q9H3D4 680 aaPredicted RBP23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 SERHL2Q9H4I8 314 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 NOTCH4Q99466 2003 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 PLD2O14939 933 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 SLC28A2O43868 658 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 FHP07954 510 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 C6P13671 934 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 ZNF91Q05481 1191 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 ARRDC3Q96B67 414 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 FAM83CQ9BQN1 747 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 TSSK6Q9BXA6 273 aa23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 ZNF717Q9BY31 904 aaPredicted RBP23.15■■□□□ 1.3
SPTSSA-201ENST00000298130 HEPACAM2A8MVW5 462 aa23.14■■□□□ 1.3
SPTSSA-201ENST00000298130 DYRK3O43781 588 aa23.14■■□□□ 1.3
SPTSSA-201ENST00000298130 WDR5P61964 334 aaKnown RBP23.14■■□□□ 1.3
SPTSSA-201ENST00000298130 CASP12Q6UXS9 341 aa23.14■■□□□ 1.3
SPTSSA-201ENST00000298130 NUS1Q96E22 293 aa23.14■■□□□ 1.3
SPTSSA-201ENST00000298130 QRSL1Q9H0R6 528 aaKnown RBP23.14■■□□□ 1.3
SPTSSA-201ENST00000298130 SLC25A19Q9HC21 320 aa23.14■■□□□ 1.3
SPTSSA-201ENST00000298130 TRPC4Q9UBN4 977 aa23.14■■□□□ 1.3
SPTSSA-201ENST00000298130 SEC14L3Q9UDX4 400 aa23.14■■□□□ 1.3
SPTSSA-201ENST00000298130 HMGN4O00479 90 aa23.14■■□□□ 1.29
SPTSSA-201ENST00000298130 PRKYO43930 277 aa23.14■■□□□ 1.29
SPTSSA-201ENST00000298130 SHFQ7M4L6 423 aa23.14■■□□□ 1.29
SPTSSA-201ENST00000298130 WDR34Q96EX3 536 aa23.14■■□□□ 1.29
SPTSSA-201ENST00000298130 SPATA7Q9P0W8 599 aa23.14■■□□□ 1.29
SPTSSA-201ENST00000298130 A3GALT2U3KPV4 340 aa23.14■■□□□ 1.29
SPTSSA-201ENST00000298130 TMPRSS11DO60235 418 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 CYP17A1P05093 508 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 H1F0P07305 194 aaKnown RBP23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 PTNP21246 168 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 OR2B6P58173 313 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 PGBD2Q6P3X8 592 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 C9orf43Q8TAL5 461 aaPredicted RBP23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 ASB15Q8WXK1 588 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 COQ10AQ96MF6 247 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 GPA33Q99795 319 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 NEK6Q9HC98 313 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 PRRT4C9JH25 899 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 PDPK1O15530 556 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 LATO43561 262 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 APOA1P02647 267 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 ADH1AP07327 375 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 CD72P21854 359 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 DEFA1P59665 94 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 DEFA3P59666 94 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 C19orf48Q6RUI8 117 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 ADCK2Q7Z695 626 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 KLHL6Q8WZ60 621 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 OR2A14Q96R47 310 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 CTRCQ99895 268 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 CNOT2Q9NZN8 540 aaKnown RBP23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 KCND3Q9UK17 655 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 MKLN1Q9UL63 735 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 ZNF232Q9UNY5 417 aa23.13■■□□□ 1.29
SPTSSA-201ENST00000298130 SH3D21A4FU49 640 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 SCG5P05408 212 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 DDCP20711 480 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 SSTR4P31391 388 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 CRYBB2P43320 205 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 DBPQ10586 325 aaPredicted RBP23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 ZNF750Q32MQ0 723 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 OR9Q1Q8NGQ5 310 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 TMEM80Q96HE8 168 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 YIPF2Q9BWQ6 316 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 MMP28Q9H239 520 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 GPR52Q9Y2T5 361 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 LSM2Q9Y333 95 aaKnown RBP23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 BOLA1Q9Y3E2 137 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 DSPPQ9NZW4 1301 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 TSPAN11A1L157 253 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 ACADLP28330 430 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 SLC6A11P48066 632 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 CAV3P56539 151 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 SAXO2Q658L1 398 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 TMC5Q6UXY8 1006 aa23.12■■□□□ 1.29
SPTSSA-201ENST00000298130 ANKRA2Q9H9E1 313 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms