RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 DEFB110Q30KQ9 67 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 SPIN4Q56A73 249 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 DEPDC1Q5TB30 811 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 TMEM107Q6UX40 140 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 ZNF614Q8N883 585 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 B3GNT7Q8NFL0 401 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 HMGB4Q8WW32 186 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 TMEM19Q96HH6 336 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 TEFMQ96QE5 360 aaKnown RBP12.85□□□□□ -0.35
TTC39B-201ENST00000297615 ZNF300Q96RE9 604 aaPredicted RBP12.85□□□□□ -0.35
TTC39B-201ENST00000297615 BBS4Q96RK4 519 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 DSN1Q9H410 356 aa12.85□□□□□ -0.35
TTC39B-201ENST00000297615 UNC13CQ8NB66 2214 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 NPIPA5A0A0B4J1W7 369 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 NPIPA7E9PJI5 369 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 PI15O43692 258 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 NPIPA8P0DM63 369 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 NR2F1P10589 423 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 TYRP1P17643 537 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 ACADLP28330 430 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 CNR2P34972 360 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 ACTR1BP42025 376 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 ACTR1AP61163 376 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 IL18R1Q13478 541 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 PTGES3Q15185 160 aaKnown RBP12.84□□□□□ -0.35
TTC39B-201ENST00000297615 TSTQ16762 297 aaKnown RBP12.84□□□□□ -0.35
TTC39B-201ENST00000297615 AGBL4Q5VU57 503 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 C1orf53Q5VUE5 145 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 CADM3Q8N126 398 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 UBE2J2Q8N2K1 259 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 YIPF6Q96EC8 236 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 ZNF282Q9UDV7 671 aaPredicted RBP12.84□□□□□ -0.35
TTC39B-201ENST00000297615 ANHXE9PGG2 379 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 ADAMDEC1O15204 470 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 GMFGO60234 142 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 KLF8O95600 359 aaPredicted RBP12.84□□□□□ -0.35
TTC39B-201ENST00000297615 SRPRAP08240 638 aaKnown RBP12.84□□□□□ -0.35
TTC39B-201ENST00000297615 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.35
TTC39B-201ENST00000297615 SOX3P41225 446 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 MAPK9P45984 424 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 NCBP2P52298 156 aaKnown RBP eCLIP12.84□□□□□ -0.356e-6■■□□□ 11.7
TTC39B-201ENST00000297615 TPTEP56180 551 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 GPAT3Q53EU6 434 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 SPATC1Q76KD6 591 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 PRSS48Q7RTY5 328 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 C6orf120Q7Z4R8 191 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 SLC9B2Q86UD5 537 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 FAM160A2Q8N612 972 aaPredicted RBP12.84□□□□□ -0.35
TTC39B-201ENST00000297615 DYNC2LI1Q8TCX1 351 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 SLC38A5Q8WUX1 472 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 TMEM168Q9H0V1 697 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 TMEM74BQ9NUR3 256 aa12.84□□□□□ -0.35
TTC39B-201ENST00000297615 PAIP2BQ9ULR5 123 aaKnown RBP12.84□□□□□ -0.35
TTC39B-201ENST00000297615 OR2A25A4D2G3 310 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 TMEM229AB2RXF0 380 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 M0R082 166 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 SLC16A5O15375 505 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 RB1P06400 928 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 HNRNPA1P09651 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
TTC39B-201ENST00000297615 POLR2CP19387 275 aaPredicted RBP12.83□□□□□ -0.36
TTC39B-201ENST00000297615 COL9A1P20849 921 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 SIM1P81133 766 aaPredicted RBP12.83□□□□□ -0.36
TTC39B-201ENST00000297615 ZC3H12BQ5HYM0 836 aaKnown RBP12.83□□□□□ -0.36
TTC39B-201ENST00000297615 TRIM40Q6P9F5 258 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 COMTD1Q86VU5 262 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 SLC34A3Q8N130 599 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 OR6Q1Q8NGQ2 317 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 ATAD3AQ9NVI7 634 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 ATG4BQ9Y4P1 393 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 MED12Q93074 2177 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 SPAG17Q6Q759 2223 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 HAT1O14929 419 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 PORP16435 677 aaPredicted RBP12.83□□□□□ -0.36
TTC39B-201ENST00000297615 MVDP53602 400 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 BTN3A2P78410 334 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 ALDH6A1Q02252 535 aaKnown RBP12.83□□□□□ -0.36
TTC39B-201ENST00000297615 HYAL2Q12891 473 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 SLAMF1Q13291 335 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 CCNJQ5T5M9 372 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 SYT6Q5T7P8 510 aaPredicted RBP12.83□□□□□ -0.36
TTC39B-201ENST00000297615 NDUFAF5Q5TEU4 345 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 SYCE2Q6PIF2 218 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 ZNF793Q6ZN11 406 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 GHDCQ8N2G8 530 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 METTL27Q8N6F8 245 aaPredicted RBP12.83□□□□□ -0.36
TTC39B-201ENST00000297615 OR52E1Q8NGJ3 308 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 EFCAB11Q9BUY7 163 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 CNPPD1Q9BV87 410 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 WDR12Q9GZL7 423 aaKnown RBP12.83□□□□□ -0.36
TTC39B-201ENST00000297615 AKIP1Q9NQ31 210 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 GPR52Q9Y2T5 361 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 NCOR1O75376 2440 aa12.83□□□□□ -0.36
TTC39B-201ENST00000297615 APODP05090 189 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 KELP23276 732 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 TGFBR2P37173 567 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 CCT3P49368 545 aaKnown RBP12.82□□□□□ -0.36
TTC39B-201ENST00000297615 DCDC1P59894 354 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 DSTNP60981 165 aa12.82□□□□□ -0.36
TTC39B-201ENST00000297615 VEZF1Q14119 521 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms