RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 MARCH9Q86YJ5 346 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 SYNPOQ8N3V7 929 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 POF1BQ8WVV4 589 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 RNFT2Q96EX2 444 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZFP3Q96NJ6 502 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 C17orf62Q9BQA9 187 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 ANKHQ9HCJ1 492 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 ACER3Q9NUN7 267 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 NAALAD2Q9Y3Q0 740 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 CMAHPQ9Y471 501 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 EYSQ5T1H1 3165 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 K7ESM1 405 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 TEX28O15482 410 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 POP7O75817 140 aaKnown RBP12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 PDE9AO76083 593 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 ACRP10323 421 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 CYP2A6P11509 494 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 TYRP14679 529 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 CD9P21926 228 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 PPP2R1BP30154 601 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 WSCD2Q2TBF2 565 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 REEP3Q6NUK4 255 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 BBS10Q8TAM1 723 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 SUN5Q8TC36 379 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 TRMT61AQ96FX7 289 aaKnown RBP12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 FRMD6Q96NE9 622 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZNF558Q96NG5 402 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 NELL2Q99435 816 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 C11orf54Q9H0W9 315 aaPredicted RBP12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 EGLN3Q9H6Z9 239 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 CXorf36Q9H7Y0 433 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 FBXL12Q9NXK8 326 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZNF236Q9UL36 1845 aa12.67□□□□□ -0.38
TNFRSF21-201ENST00000296861 WASH3PC4AMC7 463 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 HOXC11O43248 304 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 PRMT3O60678 531 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 SCN2BO60939 215 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 TOXO94900 526 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 CBSLP0DN79 551 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 CBSP35520 551 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 FADDQ13158 208 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 MRPL58Q14197 206 aaKnown RBP12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 LRRC32Q14392 662 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 SPIN4Q56A73 249 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 FAHD1Q6P587 224 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZNF730Q6ZMV8 503 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 LINC00299Q6ZSB3 139 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 OXR1Q8N573 874 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZNF557Q8N988 423 aaPredicted RBP12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 UCN3Q969E3 161 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 TCEAL4Q96EI5 215 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 TMEM39AQ9NV64 488 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 GNB5O14775 395 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 CSO75390 466 aaKnown RBP12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 PCGF2P35227 344 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 CRYBA2P53672 197 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 SEC23BQ15437 767 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 SSX1Q16384 188 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 BTBD16Q32M84 506 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 C9orf64Q5T6V5 341 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 ZNF367Q7RTV3 350 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 C6orf120Q7Z4R8 191 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 CCDC116Q8IYX3 515 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 Q8N402 240 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 L3MBTL4Q8NA19 623 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 UXS1Q8NBZ7 420 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 DENND6BQ8NEG7 585 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 IL17RDQ8NFM7 739 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR8J2Q8NGG1 315 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR52N2Q8NGI0 321 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR5AR1Q8NGP9 310 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 CRELD1Q96HD1 420 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 SLC22A4Q9H015 551 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR51V1Q9H2C8 321 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 TMPRSS11EQ9UL52 423 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 GSTK1Q9Y2Q3 226 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 GRM6O15303 877 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 SOCS5O75159 536 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 ADRA2AP08913 450 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 HTR3AP46098 478 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 SLC30A6Q6NXT4 461 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 C17orf64Q86WR6 236 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 GALNT13Q8IUC8 556 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 TRIM63Q969Q1 353 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 REPS1Q96D71 796 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 MVB12BQ9H7P6 319 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 CREBZFQ9NS37 354 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 VCANP13611 3396 aa12.66□□□□□ -0.38
TNFRSF21-201ENST00000296861 PRAMEF25A6NGN4 478 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 SLC30A4O14863 429 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 CPN2P22792 545 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 CCT3P49368 545 aaKnown RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 RPS25P62851 125 aaKnown RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 HSDL2Q6YN16 418 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 PDZD3Q86UT5 571 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 TP53I13Q8NBR0 393 aaPredicted RBP12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR4F15Q8NGB8 312 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR4K5Q8NGD3 323 aa12.65□□□□□ -0.38
TNFRSF21-201ENST00000296861 OR6C4Q8NGE1 309 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms