RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 HES5Q5TA89 166 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 MEX3DQ86XN8 651 aaKnown RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 RBM12BQ8IXT5 1001 aaKnown RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 MMP28Q9H239 520 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 KCNH6Q9H252 994 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 PCDHGB2Q9Y5G2 931 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 HMX3A6NHT5 357 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 BRINP1O60477 761 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 RAD1O60671 282 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 ZNF821O75541 412 aaPredicted RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 CTHP32929 405 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 FASLGP48023 281 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 IDH3GP51553 393 aaPredicted RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 RAB15P59190 212 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 RPL26P61254 145 aaKnown RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 KCNAB2Q13303 367 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 TMIGD1Q6UXZ0 262 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 METTL25Q8N6Q8 603 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 SLAIN1Q8ND83 568 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 SLC22A17Q8WUG5 538 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 TFGQ92734 400 aaPredicted RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 ZBTB20Q9HC78 741 aaPredicted RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 MEIS3P1A6NDR6 274 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 CLEC3AO75596 197 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 CHRNA1P02708 482 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 INHAP05111 366 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 MAP2K3P46734 347 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 EMX2Q04743 252 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 PM20D2Q8IYS1 436 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 ZSCAN4Q8NAM6 433 aaPredicted RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 DMAC2Q9NW81 257 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 A0A1W2PQ45 241 aaPredicted RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 A0A1W2PQY0 241 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 ETV3P41162 512 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 GNMTQ14749 295 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 C14orf80Q86SX3 495 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 PRR18Q8N4B5 295 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.47■□□□□ 0.073e-6■■■■■ 40
SSRP1-202ENST00000293880 PNPLA2Q96AD5 504 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 SLC22A18Q96BI1 424 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 NECAB3Q96P71 396 aaPredicted RBP15.47■□□□□ 0.07
SSRP1-202ENST00000293880 PCDHB3Q9Y5E6 796 aa15.47■□□□□ 0.07
SSRP1-202ENST00000293880 MT-ND2P03891 347 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 EBLN1P0CF75 366 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 GKN3PP0CG01 181 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 HK3P52790 923 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 TAS2R43P59537 309 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 SCML4Q8N228 414 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 CPT1CQ8TCG5 803 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 FAM120CQ9NX05 1096 aaKnown RBP15.46■□□□□ 0.07
SSRP1-202ENST00000293880 FMO6PO60774 539 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 AHSA1O95433 338 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 ANXA3P12429 323 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 POU6F2P78424 691 aaPredicted RBP15.46■□□□□ 0.07
SSRP1-202ENST00000293880 GPR33Q49SQ1 333 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 TGIF2Q9GZN2 237 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 SYT4Q9H2B2 425 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 EPHA6Q9UF33 1036 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 CLEC4EQ9ULY5 219 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 NPIPA7E9PJI5 369 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 MITFO75030 526 aaPredicted RBP15.46■□□□□ 0.07
SSRP1-202ENST00000293880 B3GALNT1O75752 331 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 CPNE6O95741 557 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 NPIPA8P0DM63 369 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 CDKN2DP55273 166 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 TRAM2Q15035 370 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 DBF4BQ8NFT6 615 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 OR4D6Q8NGJ1 314 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 OR9A1PQ8NGU1 263 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 MMABQ96EY8 250 aaPredicted RBP15.46■□□□□ 0.07
SSRP1-202ENST00000293880 NCS1P62166 190 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 CLCA4Q14CN2 919 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 IGFN1Q86VF2 1251 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 FAM86B1Q8N7N1 296 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 PIP5K1AQ99755 562 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 REEP4Q9H6H4 257 aa15.46■□□□□ 0.07
SSRP1-202ENST00000293880 FAM171A2A8MVW0 826 aa15.46■□□□□ 0.06
SSRP1-202ENST00000293880 RHOP08100 348 aa15.46■□□□□ 0.06
SSRP1-202ENST00000293880 ALG10BQ5I7T1 473 aa15.46■□□□□ 0.06
SSRP1-202ENST00000293880 BCL2L15Q5TBC7 163 aa15.46■□□□□ 0.06
SSRP1-202ENST00000293880 REEP3Q6NUK4 255 aa15.46■□□□□ 0.06
SSRP1-202ENST00000293880 DPY19L4Q7Z388 723 aa15.46■□□□□ 0.06
SSRP1-202ENST00000293880 BEST3Q8N1M1 668 aa15.46■□□□□ 0.06
SSRP1-202ENST00000293880 PCDHGA6Q9Y5G7 932 aa15.46■□□□□ 0.06
SSRP1-202ENST00000293880 TYRP14679 529 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 SLC2A5P22732 501 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 BLKP51451 505 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 ZNF630Q2M218 657 aaPredicted RBP15.45■□□□□ 0.06
SSRP1-202ENST00000293880 ADGRF1Q5T601 910 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 PQLC3Q8N755 202 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 OR2M4Q96R27 311 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 LMF1Q96S06 567 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 HSBP1L1C9JCN9 74 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 FAM72CH0Y354 149 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 STC1P52823 247 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 GPRC6AQ5T6X5 926 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 FAM72AQ5TYM5 149 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 TMEM225Q6GV28 225 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 FAM72DQ6L9T8 149 aa15.45■□□□□ 0.06
SSRP1-202ENST00000293880 LRFN4Q6PJG9 635 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms