RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 PCMT1P22061 227 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 HNRNPA2B1P22626 353 aaKnown RBP18.25■□□□□ 0.51
BRAF-201ENST00000288602 HTR1BP28222 390 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 STT3AP46977 705 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 ABATP80404 500 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 EMX1Q04741 257 aaPredicted RBP18.25■□□□□ 0.51
BRAF-201ENST00000288602 MICAQ29983 383 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 ADPRMQ3LIE5 342 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 TMEM35AQ53FP2 167 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 ZNF542PQ5EBM4 170 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 TSPYL5Q86VY4 417 aaPredicted RBP18.25■□□□□ 0.51
BRAF-201ENST00000288602 RBM45Q8IUH3 476 aaKnown RBP18.25■□□□□ 0.51
BRAF-201ENST00000288602 SLC44A3Q8N4M1 653 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 OR2L5Q8NG80 312 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 GTPBP3Q969Y2 492 aaKnown RBP18.25■□□□□ 0.51
BRAF-201ENST00000288602 CNRIP1Q96F85 164 aaPredicted RBP18.25■□□□□ 0.51
BRAF-201ENST00000288602 PIP5K1AQ99755 562 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 SRMSQ9H3Y6 488 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 ZCCHC3Q9NUD5 404 aaKnown RBP18.25■□□□□ 0.51
BRAF-201ENST00000288602 FAM32AQ9Y421 112 aaKnown RBP18.25■□□□□ 0.51
BRAF-201ENST00000288602 HEBP2Q9Y5Z4 205 aa18.25■□□□□ 0.51
BRAF-201ENST00000288602 AIFM1O95831 613 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 CCDC159P0C7I6 412 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 CDK4P11802 303 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 NPTX1Q15818 432 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 ZNF425Q6IV72 752 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 ENTHD1Q8IYW4 607 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 ZNF540Q8NDQ6 660 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 VANGL1Q8TAA9 524 aaPredicted RBP18.24■□□□□ 0.51
BRAF-201ENST00000288602 DOK1Q99704 481 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 A4GALTQ9NPC4 353 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 SCN2AQ99250 2005 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 SPEGQ15772 3267 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 FFAR1O14842 300 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 SLC28A2O43868 658 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 MFN2O95140 757 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 GADD45GO95257 159 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 DRD2P14416 443 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 ITGA2P17301 1181 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 KRT20P35900 424 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 RXRGP48443 463 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 MRPS21P82921 87 aaKnown RBP18.24■□□□□ 0.51
BRAF-201ENST00000288602 ELOAQ14241 798 aaKnown RBP18.24■□□□□ 0.51
BRAF-201ENST00000288602 PRRT3Q5FWE3 981 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 OR10G6Q8NH81 332 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 ZNF420Q8TAQ5 688 aaPredicted RBP18.24■□□□□ 0.51
BRAF-201ENST00000288602 APH1BQ8WW43 257 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 CSF3RQ99062 836 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 FAIM2Q9BWQ8 316 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 ACSS1Q9NUB1 689 aaPredicted RBP18.24■□□□□ 0.51
BRAF-201ENST00000288602 ENPP4Q9Y6X5 453 aa18.24■□□□□ 0.51
BRAF-201ENST00000288602 ZNF701M0R085 212 aaPredicted RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 M0R129 80 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 SEMA7AO75326 666 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 WBP4O75554 376 aaKnown RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 DNAJB5O75953 348 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 IFNW1P05000 195 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 AHRP35869 848 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 SRP54P61011 504 aaKnown RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 BTN3A2P78410 334 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 ALG11Q2TAA5 492 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 CCDC81Q6ZN84 652 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 PARP8Q8N3A8 854 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 NATD1Q8N6N6 113 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 DRAXINQ8NBI3 349 aaPredicted RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 SUN3Q8TAQ9 357 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 ZNF566Q969W8 418 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 MAPKAP1Q9BPZ7 522 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 TCEAL2Q9H3H9 227 aaPredicted RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 AMBNQ9NP70 447 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 TAS2R7Q9NYW3 318 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 OR6C2Q9NZP2 312 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 RNF6Q9Y252 685 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 ZW10O43264 779 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 MAGP20916 626 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 CD6P30203 668 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 GP2P55259 537 aaKnown RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 TRA2BP62995 288 aaKnown RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 TMEM107Q6UX40 140 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 Q6ZSR6 202 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 VN1R4Q7Z5H5 301 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 NRROSQ86YC3 692 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 NLGN4XQ8N0W4 816 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 MFSD9Q8NBP5 474 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 OR4D11Q8NGI4 311 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 HRASLS5Q96KN8 279 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 SLC35G5Q96KT7 338 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 COL21A1Q96P44 957 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 TREX2Q9BQ50 279 aaPredicted RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 GABARAPL3Q9BY60 117 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 C6orf106Q9H6K1 298 aaPredicted RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 KLF15Q9UIH9 416 aa18.23■□□□□ 0.51
BRAF-201ENST00000288602 NDRG2Q9UN36 371 aaKnown RBP18.23■□□□□ 0.51
BRAF-201ENST00000288602 LAMA1P25391 3075 aa18.22■□□□□ 0.51
BRAF-201ENST00000288602 VCANP13611 3396 aa18.22■□□□□ 0.51
BRAF-201ENST00000288602 SHISA7A6NL88 538 aa18.22■□□□□ 0.51
BRAF-201ENST00000288602 FAM20BO75063 409 aa18.22■□□□□ 0.51
BRAF-201ENST00000288602 POLR2CP19387 275 aaPredicted RBP18.22■□□□□ 0.51
BRAF-201ENST00000288602 IDH2P48735 452 aaKnown RBP18.22■□□□□ 0.51
BRAF-201ENST00000288602 SLC35A2P78381 396 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms