RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PLAG1Q6DJT9 500 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TP53INP2Q8IXH6 220 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 DENND6BQ8NEG7 585 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TRPV1Q8NER1 839 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 MDGA1Q8NFP4 955 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 OR2T11Q8NH01 316 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 UBA3Q8TBC4 463 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TMEM163Q8TC26 289 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 EXT2Q93063 718 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TMEM203Q969S6 136 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 NDUFB11Q9NX14 153 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 OR6C2Q9NZP2 312 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 KLHL8Q9P2G9 620 aaPredicted RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 EXTL2Q9UBQ6 330 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 METTL21EPA6NDL7 271 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 MCRIP1C9JLW8 97 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TCAPO15273 167 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SSNA1O43805 119 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TPST2O60704 377 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 STX11O75558 287 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 APBB3O95704 486 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 ZNF682O95780 498 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SDHBP21912 280 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 NFYAP23511 347 aaPredicted RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 BDKRB1P46663 353 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 RPP30P78346 268 aaKnown RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 VLDLRP98155 873 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 NRG1Q02297 640 aaPredicted RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 SPHARQ15513 63 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 GUCA2BQ16661 112 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 AKIRIN2Q53H80 203 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 ZNF789Q5FWF6 425 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 LIPKQ5VXJ0 399 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 POMZP3Q6PJE2 187 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 NAA40Q86UY6 237 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 MSRB3Q8IXL7 192 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 GPC2Q8N158 579 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 PYROXD2Q8N2H3 581 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 PTGR2Q8N8N7 351 aaPredicted RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 C12orf29Q8N999 325 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 OR5M9Q8NGP3 310 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 OR9Q1Q8NGQ5 310 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 OR52P1PQ8NH57 321 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SVIPQ8NHG7 77 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TRMT10AQ8TBZ6 339 aaKnown RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 STK35Q8TDR2 534 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 AP3S1Q92572 193 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SENP5Q96HI0 755 aaPredicted RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 FCRL1Q96LA6 429 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 HHIPQ96QV1 700 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 RNF32Q9H0A6 362 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 ACTL8Q9H568 366 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SLC25A37Q9NYZ2 338 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 EIF2B4Q9UI10 523 aaKnown RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 LSM2Q9Y333 95 aaKnown RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 CHST2Q9Y4C5 530 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 CHD5Q8TDI0 1954 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 ARHGEF33A8MVX0 844 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 ULK1O75385 1050 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 GLP2RO95838 553 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TCRBP04435 133 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 NFICP08651 508 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TFPIP10646 304 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 WARSP23381 471 aaKnown RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 VIPR1P32241 457 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 AVPR1BP47901 424 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SUOXP51687 545 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 KCNAB1Q14722 419 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 NTRK2Q16620 822 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 GSG1Q2KHT4 349 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 SPIN4Q56A73 249 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 C6orf136Q5SQH8 315 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 ANKS6Q68DC2 871 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 TMEM207Q6UWW9 146 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 RTL10Q7L3V2 364 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 ATPAF2Q8N5M1 289 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 PNPLA1Q8N8W4 532 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 ZNF527Q8NB42 609 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 WNT2BQ93097 391 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 MS4A4EQ96PG1 132 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 MVB12BQ9H7P6 319 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 EXOSC3Q9NQT5 275 aaKnown RBP8.79□□□□□ -1
PDGFC-201ENST00000274071 TAS2R3Q9NYW6 316 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 NLGN3Q9NZ94 848 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 UBP1Q9NZI7 540 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 PISDQ9UG56 409 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 DHRS7Q9Y394 339 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 PLEKHM1Q9Y4G2 1056 aa8.79□□□□□ -1
PDGFC-201ENST00000274071 COL11A1P12107 1806 aaPredicted RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 PARP14Q460N5 1801 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 M0QYV0 167 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 PHYHO14832 338 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 RAD1O60671 282 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 CSO75390 466 aaKnown RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 RECQL4O94761 1208 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 HOXC4P09017 264 aaPredicted RBP8.78□□□□□ -1
PDGFC-201ENST00000274071 DRD2P14416 443 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 GABRA1P14867 456 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 GCGRP47871 477 aa8.78□□□□□ -1
PDGFC-201ENST00000274071 STK19P49842 368 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms