RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CASP9P55211 416 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 DSTNP60981 165 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 OLR1P78380 273 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 FAM53BQ14153 422 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 SPDYE7PQ495Y7 208 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 WDR74Q6RFH5 385 aaPredicted RBP15.42■□□□□ 0.06
TPM1-201ENST00000267996 USP53Q70EK8 1073 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 EIF3MQ7L2H7 374 aaKnown RBP15.42■□□□□ 0.06
TPM1-201ENST00000267996 BMP8AQ7Z5Y6 402 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 SPRED1Q7Z699 444 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 OR4K14Q8NGD5 310 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 MOAP1Q96BY2 351 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 SLC47A1Q96FL8 570 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 ZNF570Q96NI8 536 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 ANKHQ9HCJ1 492 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 RPS6KA6Q9UK32 745 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 SPACA6W5XKT8 324 aa15.42■□□□□ 0.06
TPM1-201ENST00000267996 H0YJX3 145 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 LDLRP01130 860 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 SEMG1P04279 462 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 CFIP05156 583 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 SP9P0CG40 484 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 C8orf89P0DMQ9 161 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 GPC1P35052 558 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 MAGEA2P43356 314 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 PPM1FP49593 454 aaPredicted RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 PRIM2P49643 509 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 EMP3P54852 163 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 AQP4P55087 323 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 CDK6Q00534 326 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 ELOAQ14241 798 aaKnown RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 NR0B2Q15466 257 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 NDUFA9Q16795 377 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 TCTE1Q5JU00 501 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 NIPAL1Q6NVV3 410 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 SLC23A3Q6PIS1 610 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 PRSS42Q7Z5A4 293 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 SLC30A8Q8IWU4 369 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 HORMAD2Q8N7B1 307 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 OR5T3Q8NGG3 340 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 CCDC74AQ96AQ1 378 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 EME1Q96AY2 570 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 NAF1Q96HR8 494 aaKnown RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 BTBD9Q96Q07 612 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 SERHL2Q9H4I8 314 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 GAREM1Q9H706 876 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 COQ10BQ9H8M1 238 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 A4GALTQ9NPC4 353 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 SOHLH2Q9NX45 425 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 NTMQ9P121 344 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 RP1P56715 2156 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 UNC13CQ8NB66 2214 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 FAM149AA5PLN7 773 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 TMEM229AB2RXF0 380 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 H3BMH7 237 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 SGK494L7N484 410 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 CLOCKO15516 846 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 FOXS1O43638 330 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 MT-ND1P03886 318 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 XKP51811 444 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 PCBP3P57721 371 aaKnown RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 RAB38P57729 211 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 SIM1P81133 766 aaPredicted RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 SCARB2Q14108 478 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 AMZ1Q400G9 498 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 LRRC23Q53EV4 343 aaPredicted RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 INTS11Q5TA45 600 aaKnown RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 CEACAM20Q6UY09 585 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 FKBP9P1Q75LS8 142 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 LRRC25Q8N386 305 aaPredicted RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 Q8N9G6 341 aaPredicted RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 OR9A4Q8NGU2 314 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 TANKQ92844 425 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 TBC1D20Q96BZ9 403 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 CLK4Q9HAZ1 481 aaKnown RBP15.41■□□□□ 0.06
TPM1-201ENST00000267996 SLC6A14Q9UN76 642 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 SPTBP11277 2137 aa15.41■□□□□ 0.06
TPM1-201ENST00000267996 HYKKA2RU49 373 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 UPK1AO00322 258 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 SIGLEC6O43699 453 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 DEAF1O75398 565 aaPredicted RBP15.4■□□□□ 0.06
TPM1-201ENST00000267996 RDH16O75452 317 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 NSA2O95478 260 aaKnown RBP15.4■□□□□ 0.06
TPM1-201ENST00000267996 MSL3P1P0C860 447 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 CKMT2P17540 419 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 SKP1P63208 163 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 HSD11B2P80365 405 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 MYBPC3Q14896 1274 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 PPP4R4Q6NUP7 873 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 BHLHB9Q6PI77 547 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 KMT5CQ86Y97 462 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 EPHX4Q8IUS5 362 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 SHISA5Q8N114 240 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 D2HGDHQ8N465 521 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 ICA1LQ8NDH6 482 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 TMEM52Q8NDY8 209 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 OR56A1Q8NGH5 318 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 OR9A2Q8NGT5 310 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 NFKBIDQ8NI38 313 aa15.4■□□□□ 0.06
TPM1-201ENST00000267996 MIPOL1Q8TD10 442 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms