RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 TPMTP51580 245 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 STX4Q12846 297 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 SF3A2Q15428 464 aaKnown RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 IGSF11Q5DX21 431 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 HSDL2Q6YN16 418 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 OR51G2Q8NGK0 314 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 OR8K3Q8NH51 312 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 CXXC1Q9P0U4 656 aaPredicted RBP15.54■□□□□ 0.08
GPC1-201ENST00000264039 MGAT4CQ9UBM8 478 aa15.54■□□□□ 0.08
GPC1-201ENST00000264039 LOXHD1Q8IVV2 1947 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 MMP3P08254 477 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 PRG2P13727 222 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 SMPD1P17405 629 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 CDH11P55287 796 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 TCTE3Q8IZS6 198 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 RDH10Q8IZV5 341 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 RPLP0P6Q8NHW5 317 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 NPLOC4Q8TAT6 608 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 CIDECQ96AQ7 238 aaPredicted RBP15.53■□□□□ 0.08
GPC1-201ENST00000264039 CMTM7Q96FZ5 175 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 TEFMQ96QE5 360 aaKnown RBP15.53■□□□□ 0.08
GPC1-201ENST00000264039 ACBD6Q9BR61 282 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 CD93Q9NPY3 652 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 EQTNQ9NQ60 294 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 GULP1Q9UBP9 304 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 CDV3Q9UKY7 258 aaKnown RBP15.53■□□□□ 0.08
GPC1-201ENST00000264039 PCDHB7Q9Y5E2 793 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 TAPBPO15533 448 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 NARSO43776 548 aaKnown RBP15.53■□□□□ 0.08
GPC1-201ENST00000264039 PRAMEF11O60813 436 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 CLTBP09497 229 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 HLA-DMAP28067 261 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 OLIG3Q7RTU3 272 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 PRSS42Q7Z5A4 293 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 KRT78Q8N1N4 520 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 CPA6Q8N4T0 437 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 BTN2A2Q8WVV5 523 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 SLC25A46Q96AG3 418 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 TMEM159Q96B96 161 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 SECISBP2Q96T21 854 aaKnown RBP15.53■□□□□ 0.08
GPC1-201ENST00000264039 KATNB1Q9BVA0 655 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 GSX2Q9BZM3 304 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 C5AR2Q9P296 337 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 RBPJLQ9UBG7 517 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 EXO1Q9UQ84 846 aaKnown RBP15.53■□□□□ 0.08
GPC1-201ENST00000264039 TLR6Q9Y2C9 796 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 A0A0B4J293 547 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 ERAL1O75616 437 aaKnown RBP15.53■□□□□ 0.08
GPC1-201ENST00000264039 H2AFB2P0C5Z0 115 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 ALPPL2P10696 532 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 EDNRBP24530 442 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 NOS3P29474 1203 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 SYNPOQ8N3V7 929 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 TTC9BQ8N6N2 239 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 ZNF614Q8N883 585 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 BBS10Q8TAM1 723 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 TNFAIP8L1Q8WVP5 186 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 RNF31Q96EP0 1072 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 FOPNLQ96NB1 174 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 OR4K3Q96R72 315 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 ADAM2Q99965 735 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 FANCFQ9NPI8 374 aa15.53■□□□□ 0.08
GPC1-201ENST00000264039 FAM120CQ9NX05 1096 aaKnown RBP15.53■□□□□ 0.08
GPC1-201ENST00000264039 A0A1B0GW55 424 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 GABRR3A8MPY1 467 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 DUX4L2P0CJ85 424 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 DUX4L3P0CJ86 424 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 DUX4L4P0CJ87 422 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 DUX4L5P0CJ88 424 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 DUX4L6P0CJ89 424 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 DUX4L7P0CJ90 424 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 ACVR1BP36896 505 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 GPR176Q14439 515 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 UNC5DQ6UXZ4 953 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 ZNF730Q6ZMV8 503 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 OR4F15Q8NGB8 312 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 OR4M1Q8NGD0 313 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 OR6M1Q8NGM8 313 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 PXYLP1Q8TE99 480 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 DDOQ99489 341 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.52■□□□□ 0.082e-6■■■■□ 21
GPC1-201ENST00000264039 TMEM248Q9NWD8 314 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 DUX4Q9UBX2 424 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 ZNF282Q9UDV7 671 aaPredicted RBP15.52■□□□□ 0.08
GPC1-201ENST00000264039 SPTBP11277 2137 aa15.52■□□□□ 0.08
GPC1-201ENST00000264039 A0A1W2PRB8 838 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 HYKKA2RU49 373 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 PDCD5O14737 125 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 RECQLP46063 649 aaPredicted RBP15.52■□□□□ 0.07
GPC1-201ENST00000264039 CSRP3P50461 194 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 RPS13P62277 151 aaKnown RBP15.52■□□□□ 0.07
GPC1-201ENST00000264039 DUSP4Q13115 394 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 TUSC3Q13454 348 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 FAM171BQ6P995 826 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 CERS6Q6ZMG9 384 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 TPGS1Q6ZTW0 290 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 ZSWIM3Q96MP5 696 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 PKMYT1Q99640 499 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 PCDHGA2Q9Y5H1 932 aa15.52■□□□□ 0.07
GPC1-201ENST00000264039 CKAP5Q14008 2032 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms