RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SERHL2Q9H4I8 314 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 DNAJB9Q9UBS3 223 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 MYF5P13349 255 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 MAGEA2P43356 314 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 SIM1P81133 766 aaPredicted RBP21.09■□□□□ 0.97
SIX3-201ENST00000260653 GPR19Q15760 415 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 ZNF630Q2M218 657 aaPredicted RBP21.09■□□□□ 0.97
SIX3-201ENST00000260653 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.09■□□□□ 0.97
SIX3-201ENST00000260653 ZDHHC21Q8IVQ6 265 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 ZCCHC3Q9NUD5 404 aaKnown RBP21.09■□□□□ 0.97
SIX3-201ENST00000260653 GIMAP4Q9NUV9 329 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 ETAA1Q9NY74 926 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 SLC22A7Q9Y694 548 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 ZNF780BQ9Y6R6 833 aa21.09■□□□□ 0.97
SIX3-201ENST00000260653 TMEM229AB2RXF0 380 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 GALR3O60755 368 aaPredicted RBP21.08■□□□□ 0.97
SIX3-201ENST00000260653 RASAL1O95294 804 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 SEMG1P04279 462 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 GNSP15586 552 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 CEBPEQ15744 281 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 CYBRD1Q53TN4 286 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 TBPL2Q6SJ96 375 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 DNAJC22Q8N4W6 341 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 PACRGLQ8N7B6 248 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 ARL10Q8N8L6 244 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 GAB3Q8WWW8 586 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 RAB8BQ92930 207 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 KLHL3Q9UH77 587 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 ZNF639Q9UID6 485 aa21.08■□□□□ 0.97
SIX3-201ENST00000260653 MAGED1Q9Y5V3 778 aaPredicted RBP21.08■□□□□ 0.97
SIX3-201ENST00000260653 ARRB1P49407 418 aaPredicted RBP21.08■□□□□ 0.96
SIX3-201ENST00000260653 ZC3H12BQ5HYM0 836 aaKnown RBP21.08■□□□□ 0.96
SIX3-201ENST00000260653 TMEM107Q6UX40 140 aa21.08■□□□□ 0.96
SIX3-201ENST00000260653 FKBP9P1Q75LS8 142 aa21.08■□□□□ 0.96
SIX3-201ENST00000260653 OR9A2Q8NGT5 310 aa21.08■□□□□ 0.96
SIX3-201ENST00000260653 TCTN2Q96GX1 697 aa21.08■□□□□ 0.96
SIX3-201ENST00000260653 PSME2Q9UL46 239 aa21.08■□□□□ 0.96
SIX3-201ENST00000260653 ABCG2Q9UNQ0 655 aa21.08■□□□□ 0.96
SIX3-201ENST00000260653 CSNK1G3Q9Y6M4 447 aa21.08■□□□□ 0.96
SIX3-201ENST00000260653 IGHV5-51A0A0C4DH38 117 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 DENRO43583 198 aaKnown RBP21.07■□□□□ 0.96
SIX3-201ENST00000260653 UBTFL6P0CB48 400 aaPredicted RBP21.07■□□□□ 0.96
SIX3-201ENST00000260653 MPIP34949 423 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 OR1D5P58170 312 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 VLDLRP98155 873 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 PLK5Q496M5 336 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 C1orf210Q8IVY1 113 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 ARHGEF39Q8N4T4 335 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 IL1RAPQ9NPH3 570 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 FSCN3Q9NQT6 498 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 UNC13CQ8NB66 2214 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 RP1P56715 2156 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 hCG_2039718K7EN88 272 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 HMGN4O00479 90 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 DLGAP1O14490 977 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 EPHA4P54764 986 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 PPP1R8Q12972 351 aaKnown RBP21.07■□□□□ 0.96
SIX3-201ENST00000260653 LTB4RQ15722 352 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 OTUD3Q5T2D3 398 aaPredicted RBP21.07■□□□□ 0.96
SIX3-201ENST00000260653 OR52E8Q6IFG1 317 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 OR4N5Q8IXE1 308 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 TAMM41Q96BW9 452 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 Q9H521 79 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 LYRM4Q9HD34 91 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 SEMA3GQ9NS98 782 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 ADPRHL2Q9NX46 363 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 ZSCAN32Q9NX65 697 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 MS4A12Q9NXJ0 267 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 PILRBQ9UKJ0 227 aa21.07■□□□□ 0.96
SIX3-201ENST00000260653 WDFY4Q6ZS81 3184 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 FRYLO94915 3013 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 TLCD2A6NGC4 264 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 SGK494L7N484 410 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 GNGT2O14610 69 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 SUV39H1O43463 412 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 PRKAG1P54619 331 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 SLC44A2Q8IWA5 706 aaPredicted RBP21.06■□□□□ 0.96
SIX3-201ENST00000260653 OR5D16Q8NGK9 328 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 SLC35G5Q96KT7 338 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 SOHLH2Q9NX45 425 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 NUDT21O43809 227 aaKnown RBP21.06■□□□□ 0.96
SIX3-201ENST00000260653 BCHEP06276 602 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 HOXB6P17509 224 aaKnown RBP21.06■□□□□ 0.96
SIX3-201ENST00000260653 TLX1P31314 330 aaPredicted RBP21.06■□□□□ 0.96
SIX3-201ENST00000260653 MLLT3P42568 568 aaPredicted RBP21.06■□□□□ 0.96
SIX3-201ENST00000260653 PCBP3P57721 371 aaKnown RBP21.06■□□□□ 0.96
SIX3-201ENST00000260653 SHC2P98077 582 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 TMEM64Q6YI46 380 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 OR9A4Q8NGU2 314 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 SLC38A5Q8WUX1 472 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 GATA6Q92908 595 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 CNBD2Q96M20 576 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 NR1H4Q96RI1 486 aaPredicted RBP21.06■□□□□ 0.96
SIX3-201ENST00000260653 ANKRA2Q9H9E1 313 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 ANGPT4Q9Y264 503 aa21.06■□□□□ 0.96
SIX3-201ENST00000260653 M0QX08 132 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 RDH16O75452 317 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 MC3RP41968 323 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 RXRGP48443 463 aa21.05■□□□□ 0.96
SIX3-201ENST00000260653 GK3PQ14409 553 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms