RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PRDM9Q9NQV7 894 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 AHSPQ9NZD4 102 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 SPACA6W5XKT8 324 aa15.74■□□□□ 0.11
SDCBP-201ENST00000260130 CLDN4O14493 209 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 LYNP07948 512 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 HSD3B1P14060 373 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 HSD3B2P26439 372 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 BTKQ06187 659 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 ZNF33BQ06732 778 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 PGM2L1Q6PCE3 622 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 MAVSQ7Z434 540 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 ZNF595Q8IYB9 648 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 POU5F2Q8N7G0 328 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 FDCSPQ8NFU4 85 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 HBEGFQ99075 208 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 SLC25A23Q9BV35 468 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 FBXW2Q9UKT8 454 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 MMACHCQ9Y4U1 282 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 PCDHGA9Q9Y5G4 932 aaKnown RBP15.73■□□□□ 0.11
SDCBP-201ENST00000260130 TMEM114B3SHH9 223 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 EEDO75530 441 aaKnown RBP15.73■□□□□ 0.11
SDCBP-201ENST00000260130 UBTFL6P0CB48 400 aaPredicted RBP15.73■□□□□ 0.11
SDCBP-201ENST00000260130 NCF2P19878 526 aaPredicted RBP15.73■□□□□ 0.11
SDCBP-201ENST00000260130 MAOAP21397 527 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 FOXA1P55317 472 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 HSD17B7P56937 341 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 PCOLCEQ15113 449 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 NUDT13Q86X67 352 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 TMEM52Q8NDY8 209 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 C9orf43Q8TAL5 461 aaPredicted RBP15.73■□□□□ 0.11
SDCBP-201ENST00000260130 CSF3RQ99062 836 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 MRPL1Q9BYD6 325 aaKnown RBP15.73■□□□□ 0.11
SDCBP-201ENST00000260130 SHCBP1LQ9BZQ2 653 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 SLC25A18Q9H1K4 315 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 PRTFDC1Q9NRG1 225 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 RIC8BQ9NVN3 520 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 MS4A12Q9NXJ0 267 aa15.73■□□□□ 0.11
SDCBP-201ENST00000260130 G3BP2Q9UN86 482 aaKnown RBP15.73■□□□□ 0.11
SDCBP-201ENST00000260130 KALRNO60229 2985 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 A0A0A6YYD5 115 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 IGHV3-20A0A0C4DH32 117 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 ZNF195O14628 629 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 NPHS1O60500 1241 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 CRCPO75575 148 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 ITGA3P26006 1051 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 HNRNPFP52597 415 aaKnown RBP15.72■□□□□ 0.11
SDCBP-201ENST00000260130 CSTF3Q12996 717 aaKnown RBP15.72■□□□□ 0.11
SDCBP-201ENST00000260130 TCTN3Q6NUS6 607 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 CYP20A1Q6UW02 462 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 GPR180Q86V85 440 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 METTL4Q8N3J2 472 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 OR6Y1Q8NGX8 325 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 SLC26A7Q8TE54 656 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 NECTIN3Q9NQS3 549 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 VPS29Q9UBQ0 182 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 IGKV3D-11A0A0A0MRZ8 115 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 CPN2P22792 545 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 HTR6P50406 440 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 ERFP50548 548 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 OR4D2P58180 307 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 Q0VFX4 171 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 SLC13A2Q13183 592 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 RAPSNQ13702 412 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 MYBPC3Q14896 1274 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 SFT2D3Q587I9 215 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 METTL21CQ5VZV1 264 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 PAGE2Q7Z2X7 111 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 ZFAND2BQ8WV99 257 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 IMMP1LQ96LU5 166 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 NUDT9Q9BW91 350 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 TNFRSF12AQ9NP84 129 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 ZNF71Q9NQZ8 489 aaPredicted RBP15.72■□□□□ 0.11
SDCBP-201ENST00000260130 GPR83Q9NYM4 423 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 PHF11Q9UIL8 331 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 ADAM29Q9UKF5 820 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 ATRXP46100 2492 aa15.72■□□□□ 0.11
SDCBP-201ENST00000260130 TCRBV16S1A1N1A0A5B0 115 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 BLACEA4D250 179 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 CTNSO60931 367 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 SEC24DO94855 1032 aaPredicted RBP15.71■□□□□ 0.11
SDCBP-201ENST00000260130 HSPA4LO95757 839 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 FAM58BPP0C7Q3 252 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 UROSP10746 265 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 ICAM2P13598 275 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 ROR2Q01974 943 aaKnown RBP15.71■□□□□ 0.11
SDCBP-201ENST00000260130 TBL3Q12788 808 aaKnown RBP15.71■□□□□ 0.11
SDCBP-201ENST00000260130 MRM1Q6IN84 353 aaKnown RBP15.71■□□□□ 0.11
SDCBP-201ENST00000260130 ACAD11Q709F0 780 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 EFCAB3Q8N7B9 438 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 PYDC1Q8WXC3 89 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 LPAR4Q99677 370 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 WDR77Q9BQA1 342 aaPredicted RBP15.71■□□□□ 0.11
SDCBP-201ENST00000260130 KLHL4Q9C0H6 718 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 LYARQ9NX58 379 aaKnown RBP15.71■□□□□ 0.11
SDCBP-201ENST00000260130 TP53TG5Q9Y2B4 290 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 ATG4BQ9Y4P1 393 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 ASB4Q9Y574 426 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 BSNQ9UPA5 3926 aa15.71■□□□□ 0.11
SDCBP-201ENST00000260130 SERTM1A2A2V5 107 aa15.7■□□□□ 0.1
SDCBP-201ENST00000260130 PROM1O43490 865 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms