RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CNPPD1Q9BV87 410 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 TP63Q9H3D4 680 aaPredicted RBP17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 ACSS3Q9H6R3 686 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 ZDHHC11Q9H8X9 412 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 SEMA4BQ9NPR2 832 aaPredicted RBP17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 SACM1LQ9NTJ5 587 aa17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 TUBA8Q9NY65 449 aaPredicted RBP17.57■□□□□ 0.4
TM6SF1-201ENST00000258909 A0A1W2PR48 441 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 URI1O94763 535 aaPredicted RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ACSL3O95573 720 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 P04436 131 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 CELA3AP09093 270 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ALOX15P16050 662 aaPredicted RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 TLX1P31314 330 aaPredicted RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 PIGAP37287 484 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 HERVK_113P63132 956 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ERVK-8P63133 956 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 PHEXP78562 749 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 PLIN5Q00G26 463 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 MPEG1Q2M385 716 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 PIGGQ5H8A4 983 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 TECRLQ5HYJ1 363 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 PAOXQ6QHF9 649 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 CYP20A1Q6UW02 462 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 PTGR2Q8N8N7 351 aaPredicted RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 GOLM1Q8NBJ4 401 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 WDR20Q8TBZ3 569 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 REPS1Q96D71 796 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 PHF21BQ96EK2 531 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 SGCZQ96LD1 299 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 C16orf45Q96MC5 204 aaPredicted RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ERVK-6Q9BXR3 956 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 NOL11Q9H8H0 719 aaKnown RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 PNPLA3Q9NST1 481 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ERVK-19Q9WJR5 959 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 TSC22D4Q9Y3Q8 395 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ASB4Q9Y574 426 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 NINQ8N4C6 2090 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 INTS1Q8N201 2190 aaKnown RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 PHF3Q92576 2039 aaKnown RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 A0A0A6YYD5 115 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ATP6AP2A0A1C7CYW4 349 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 OR7A17O14581 309 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 DYRK3O43781 588 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ATP6AP2O75787 350 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 FAM58BPP0C7Q3 252 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 BUD31P41223 144 aaPredicted RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 FOXO1Q12778 655 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ZNF267Q14586 743 aaPredicted RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 GXYLT1Q4G148 440 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 NDUFAF5Q5TEU4 345 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 RGS9BPQ6ZS82 235 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 CCDC71Q8IV32 467 aaPredicted RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ST13P4Q8IZP2 240 aaPredicted RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 OR52B6Q8NGF0 335 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 NUBPLQ8TB37 319 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 ATP6V1E2Q96A05 226 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 FBXL20Q96IG2 436 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 GAL3ST4Q96RP7 486 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 SMC6Q96SB8 1091 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 UCK2Q9BZX2 261 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 CDC42EP4Q9H3Q1 356 aaKnown RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 IL1RL2Q9HB29 575 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 DMGDHQ9UI17 866 aaKnown RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 RNF6Q9Y252 685 aa17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 TNPO3Q9Y5L0 923 aaKnown RBP17.56■□□□□ 0.4
TM6SF1-201ENST00000258909 NCKAP5O14513 1909 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 CELSR1Q9NYQ6 3014 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 A0A1W2PS29 197 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 NKX2-6A6NCS4 301 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 FAM90A27PA6NNH2 459 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 OR10H2O60403 315 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 UGDHO60701 494 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 CLDN9O95484 217 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 NADKO95544 446 aaPredicted RBP17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 GPR75O95800 540 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 AIFM1O95831 613 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 NR2F6P10588 404 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 ELAVL4P26378 380 aaKnown RBP17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 KRTAP10-9P60411 292 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 PMPCAQ10713 525 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 CUL3Q13618 768 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 ZNF791Q3KP31 576 aaPredicted RBP17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 TMEM211Q6ICI0 200 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 MRM1Q6IN84 353 aaKnown RBP17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 LYPD8Q6UX82 237 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 MEX3BQ6ZN04 569 aaKnown RBP17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 FAM109AQ8N4B1 249 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 L3MBTL4Q8NA19 623 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 SLC22A8Q8TCC7 542 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 IFT81Q8WYA0 676 aa17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 NSUN5Q96P11 429 aaKnown RBP17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 DDX31Q9H8H2 851 aaKnown RBP17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 LYARQ9NX58 379 aaKnown RBP17.55■□□□□ 0.4
TM6SF1-201ENST00000258909 AKAP9Q99996 3911 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 HCFC1P51610 2035 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 IQANK1A0A1B0GTG1 560 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 CCDC189A1A4V9 331 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 LRATO95237 230 aa17.54■□□□□ 0.4
TM6SF1-201ENST00000258909 INHBAP08476 426 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms