RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 HEPACAMQ14CZ8 416 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 C6orf141Q5SZD1 244 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 C1orf189Q5VU69 101 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 AP1ARQ63HQ0 302 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 METRNLQ641Q3 311 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 BTLAQ7Z6A9 289 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 ZNF557Q8N988 423 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 BBS10Q8TAM1 723 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 LMX1AQ8TE12 382 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 ZFP90Q8TF47 636 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 MRPL38Q96DV4 380 aaKnown RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 SLC6A18Q96N87 628 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 TGM7Q96PF1 710 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 RBM4BQ9BQ04 359 aaKnown RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 RBM4Q9BWF3 364 aaKnown RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 ANKRD60Q9BZ19 345 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 PAK1IP1Q9NWT1 392 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 AHSPQ9NZD4 102 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 KLF15Q9UIH9 416 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 ICKQ9UPZ9 632 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 A0A0A6YYC8 382 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 I3L1I5 382 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 RDH16O75452 317 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 C5AR1P21730 350 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 ACADLP28330 430 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 ASMTP46597 345 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 RPS7P62081 194 aaKnown RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 HPCAP84074 193 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 SLC13A2Q13183 592 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 SP140Q13342 867 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 NDUFAF6Q330K2 333 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 SLC34A3Q8N130 599 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 ZCCHC7Q8N3Z6 543 aaKnown RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 TMIEQ8NEW7 156 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 TNIP2Q8NFZ5 429 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 PHOSPHO2Q8TCD6 241 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 CHTF18Q8WVB6 975 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 FAM3CQ92520 227 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 DACH2Q96NX9 599 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 MBOAT4Q96T53 435 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 MRGBPQ9NV56 204 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 SPATA6Q9NWH7 488 aaPredicted RBP8.62□□□□□ -1.03
CKAP2-201ENST00000258607 TMCO1Q9UM00 188 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 CARD8Q9Y2G2 431 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 SLC27A6Q9Y2P4 619 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 ATMQ13315 3056 aa8.62□□□□□ -1.03
CKAP2-201ENST00000258607 A0A1W2PQF6 199 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 A0A1W2PR48 441 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PSMD11O00231 422 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 SCN2BO60939 215 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PABPC4LP0CB38 370 aaKnown RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PTPN6P29350 595 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 NTSP30990 170 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 TRMT12Q53H54 448 aaKnown RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 TYW3Q6IPR3 259 aaKnown RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ARMC6Q6NXE6 501 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PTCHD4Q6ZW05 846 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ARMC8Q8IUR7 673 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PRR22Q8IZ63 422 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 CADM2Q8N3J6 435 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 TCEANCQ8N8B7 351 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 SLC16A11Q8NCK7 471 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 CHDHQ8NE62 594 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 OR9A4Q8NGU2 314 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 OR5K1Q8NHB7 308 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 SP7Q8TDD2 431 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 GPR151Q8TDV0 419 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 GIPC3Q8TF64 312 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ZFPM2Q8WW38 1151 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 RGMAQ96B86 450 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 TM4SF18Q96CE8 201 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PEX11GQ96HA9 241 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 SLC35G5Q96KT7 338 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 GLIPR2Q9H4G4 154 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 SLC6A20Q9NP91 592 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 FBXO34Q9NWN3 711 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 MARK1Q9P0L2 795 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 DKK3Q9UBP4 350 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 RPS6KA6Q9UK32 745 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 TMCC3Q9ULS5 477 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 CEPT1Q9Y6K0 416 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 CEP295Q9C0D2 2601 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 ACACAQ13085 2346 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 H0YIV9 168 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 SLC1A7O00341 560 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 CAPN5O15484 640 aaPredicted RBP8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PCDHGA12O60330 932 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 CTSVO60911 334 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 SEMA4FO95754 770 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 AIFM1O95831 613 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 IFNW1P05000 195 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 FCER2P06734 321 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 XKP51811 444 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 IFI44LQ53G44 452 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 KLHL12Q53G59 568 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 BROXQ5VW32 411 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 TTC23Q5W5X9 447 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 PAQR6Q6TCH4 344 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 RIMKLAQ8IXN7 391 aa8.61□□□□□ -1.03
CKAP2-201ENST00000258607 TMCO5AQ8N6Q1 288 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms