RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SYPP08247 313 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 HSD17B1P14061 328 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 EIF1AXP47813 144 aaKnown RBP18.13■□□□□ 0.49
PTPRE-201ENST00000254667 SLC7A9P82251 487 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 BNIP3Q12983 259 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 LAPTM4AQ15012 233 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 CARTPTQ16568 116 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.13■□□□□ 0.49
PTPRE-201ENST00000254667 ZDHHC1Q8WTX9 485 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 BRF2Q9HAW0 419 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 OR1A2Q9Y585 309 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 C5orf51A6NDU8 294 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 GPR89AB7ZAQ6 455 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 GPR89BP0CG08 455 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 S1PR1P21453 382 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 ZNF84P51523 738 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 ZSCAN4Q8NAM6 433 aaPredicted RBP18.13■□□□□ 0.49
PTPRE-201ENST00000254667 OR52N2Q8NGI0 321 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 HOXD1Q9GZZ0 328 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 EPHA6Q9UF33 1036 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 E7EQ34 232 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 CCRL2O00421 344 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 HNRNPA1L2Q32P51 320 aaKnown RBP18.13■□□□□ 0.49
PTPRE-201ENST00000254667 PAQR7Q86WK9 346 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 RBM12BQ8IXT5 1001 aaKnown RBP18.13■□□□□ 0.49
PTPRE-201ENST00000254667 OR6N2Q8NGY6 317 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 C16orf78Q8WTQ4 265 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 JPH3Q8WXH2 748 aaPredicted RBP18.13■□□□□ 0.49
PTPRE-201ENST00000254667 CD207Q9UJ71 328 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 ZNF451Q9Y4E5 1061 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 MYH6P13533 1939 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 A0A0G2JPF8 293 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 HNRNPCL3B7ZW38 293 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 IL33O95760 270 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 FGF4P08620 206 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 HNRNPCL4P0DMR1 293 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 RORAP35398 523 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 PER3P56645 1201 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 MLLT1Q03111 559 aaPredicted RBP18.13■□□□□ 0.49
PTPRE-201ENST00000254667 ASB18Q6ZVZ8 466 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 STX12Q86Y82 276 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 ACVR1CQ8NER5 493 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 TXLNGYQ9BZA5 131 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 RDH14Q9HBH5 336 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 FZD3Q9NPG1 666 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 USP3Q9Y6I4 520 aa18.13■□□□□ 0.49
PTPRE-201ENST00000254667 S100A1P23297 94 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 CLCN2P51788 898 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 OR51G2Q8NGK0 314 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 CD200R1Q8TD46 325 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 HSPA12BQ96MM6 686 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 SYT11Q9BT88 431 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 CMAHPQ9Y471 501 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 NPIPB15A6NHN6 443 aaPredicted RBP18.12■□□□□ 0.49
PTPRE-201ENST00000254667 NPIPA2E9PIF3 369 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 NPIPA3F8WFD2 350 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 EIF1AYO14602 144 aaKnown RBP18.12■□□□□ 0.49
PTPRE-201ENST00000254667 ERVPABLB-1P60509 514 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 SGTBQ96EQ0 304 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 ZNF559Q9BR84 538 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 LINC00597Q9H2U6 94 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 PTGDR2Q9Y5Y4 395 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 HSPE1-MOB4S4R3N1 261 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 OCLNQ16625 522 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 SLC36A3Q495N2 470 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 GLT8D1Q68CQ7 371 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 OR8K5Q8NH50 307 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 MUS81Q96NY9 551 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 MNTQ99583 582 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 PITHD1Q9GZP4 211 aaPredicted RBP18.12■□□□□ 0.49
PTPRE-201ENST00000254667 PMF1-BGLAPU3KQ54 211 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 ST3GAL4Q11206 333 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 CCINQ13939 588 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 MOGQ16653 247 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 RHBDF1Q96CC6 855 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 SLC30A2Q9BRI3 323 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 TTYH2Q9BSA4 534 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.12■□□□□ 0.49
PTPRE-201ENST00000254667 NCDNQ9UBB6 729 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 MYH13Q9UKX3 1938 aa18.12■□□□□ 0.49
PTPRE-201ENST00000254667 G3V2L1 256 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 SCO2O43819 266 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 SLC16A8O95907 504 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 CRISP1P54107 249 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 LRP8Q14114 963 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 CYP27C1Q4G0S4 372 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 LCN8Q6JVE9 175 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 ZFYVE21Q9BQ24 234 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 GGT1P19440 569 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 CEACAM7Q14002 265 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 COMMD6Q7Z4G1 85 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 SLC44A3Q8N4M1 653 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 TRPV4Q9HBA0 871 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 BAIAP2Q9UQB8 552 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 TIAM2Q8IVF5 1701 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 C2orf92A0A1B0GVN3 265 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 SLC19A2O60779 497 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 MRPL49Q13405 166 aaKnown RBP18.11■□□□□ 0.49
PTPRE-201ENST00000254667 LCTLQ6UWM7 567 aa18.11■□□□□ 0.49
PTPRE-201ENST00000254667 TMIEQ8NEW7 156 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms