RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 CHRNB1P11230 501 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 UQCRC1P31930 480 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 RFX2P48378 723 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 LIM2P55344 173 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 GPLD1P80108 840 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 P2RY14Q15391 338 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 SYPL1Q16563 259 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 TATDN3Q17R31 274 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 AMIGO1Q86WK6 493 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 HORMAD2Q8N7B1 307 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 UCN3Q969E3 161 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 ST6GAL2Q96JF0 529 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 CASD1Q96PB1 797 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 CDCP1Q9H5V8 836 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 MVB12BQ9H7P6 319 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 TMEM45AQ9NWC5 275 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 TMPRSS11EQ9UL52 423 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 SCN10AQ9Y5Y9 1956 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 FAM183AA6NL82 134 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 PPM1DO15297 605 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 PRKYO43930 277 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 SERPINI2O75830 405 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 PPIBP23284 216 aaKnown RBP11.39□□□□□ -0.59
USHBP1-201ENST00000252597 ACVR2AP27037 513 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 IMPA1P29218 277 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 SOX18P35713 384 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 RAE1P78406 368 aaKnown RBP11.39□□□□□ -0.59
USHBP1-201ENST00000252597 CDK10Q15131 360 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 KLHL12Q53G59 568 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 SLC35F1Q5T1Q4 408 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 IDNKQ5T6J7 187 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 L3MBTL4Q8NA19 623 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 C16orf78Q8WTQ4 265 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 FBLIM1Q8WUP2 373 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 CHAC2Q8WUX2 184 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 PIGKQ92643 395 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 MCUBQ9NWR8 336 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 SPG21Q9NZD8 308 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 GULP1Q9UBP9 304 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 CORO2BQ9UQ03 480 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 PCM1Q15154 2024 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 ARID1AO14497 2285 aa11.39□□□□□ -0.59
USHBP1-201ENST00000252597 CCL16O15467 120 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 PDE9AO76083 593 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 PRKCAP17252 672 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CBLP22681 906 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 NNMTP40261 264 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 SLC6A12P48065 614 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 AP1S2P56377 157 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CTBP2P56545 445 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 TMEM115Q12893 351 aaPredicted RBP11.38□□□□□ -0.59
USHBP1-201ENST00000252597 LARS2Q15031 903 aaKnown RBP11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CEP78Q5JTW2 689 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 RFPL4BQ6ZWI9 263 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CCDC190Q86UF4 302 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 MARCH9Q86YJ5 346 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 RASGEF1AQ8N9B8 481 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF480Q8WV37 535 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 REPS1Q96D71 796 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CLIP3Q96DZ5 547 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 GABARAPL3Q9BY60 117 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CXorf36Q9H7Y0 433 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 GALNT9Q9HCQ5 603 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 PTGFRNQ9P2B2 879 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CCL26Q9Y258 94 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 RALGAPA2Q2PPJ7 1873 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 PEPDP12955 493 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 DGKGP49619 791 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 MTAPQ13126 283 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 Q5BKY6 102 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 LIPJQ5W064 366 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 TTC23LQ6PF05 361 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CNIH2Q6PI25 160 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 PLPP6Q8IY26 295 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 OR4F15Q8NGB8 312 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 OR52N2Q8NGI0 321 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 OR5H6Q8NGV6 325 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 KCTD7Q96MP8 289 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 ZFP3Q96NJ6 502 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 TAC3Q9UHF0 121 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 PADI2Q9Y2J8 665 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 F5P12259 2224 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 TRIOO75962 3097 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 H7BY64 318 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 ATG13O75143 517 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 LRG1P02750 347 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 PSMB5P28074 263 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 CD79BP40259 229 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 ETV5P41161 510 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 ETV1P50549 477 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 LASP1Q14847 261 aaKnown RBP11.38□□□□□ -0.59
USHBP1-201ENST00000252597 ZNF79Q15937 498 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 LCN1P1Q5VSP4 162 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 REEP3Q6NUK4 255 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 GDPD4Q6W3E5 623 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 OXR1Q8N573 874 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 KIAA1958Q8N8K9 716 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 FLCNQ8NFG4 579 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 BEST4Q8NFU0 473 aa11.38□□□□□ -0.59
USHBP1-201ENST00000252597 BBS10Q8TAM1 723 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms