RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SLC22A10Q63ZE4 541 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 KLC3Q6P597 504 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 TRILQ7L0X0 811 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 ST13P4Q8IZP2 240 aaPredicted RBP19.46■□□□□ 0.71
NEDD8-201ENST00000250495 RNF175Q8N4F7 328 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 FBXL20Q96IG2 436 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 PNPLA3Q9NST1 481 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 PSD3Q9NYI0 1048 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 ITGB1BP2Q9UKP3 347 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 ATG4BQ9Y4P1 393 aa19.46■□□□□ 0.71
NEDD8-201ENST00000250495 TNPO3Q9Y5L0 923 aaKnown RBP19.46■□□□□ 0.71
NEDD8-201ENST00000250495 INTS1Q8N201 2190 aaKnown RBP19.45■□□□□ 0.7
NEDD8-201ENST00000250495 IQANK1A0A1B0GTG1 560 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 FIGNL2A6NMB9 653 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 PROM1O43490 865 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 SUSD5O60279 629 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 GPR75O95800 540 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 CCL3P10147 92 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 ACVR2AP27037 513 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 PIK3CGP48736 1102 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 NUP107P57740 925 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 RPS13P62277 151 aaKnown RBP19.45■□□□□ 0.7
NEDD8-201ENST00000250495 ETF1P62495 437 aaKnown RBP19.45■□□□□ 0.7
NEDD8-201ENST00000250495 IRF9Q00978 393 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 FOXO1Q12778 655 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 PCBP2Q15366 365 aaKnown RBP eCLIP19.45■□□□□ 0.79e-10■□□□□ 8.1
NEDD8-201ENST00000250495 ZNF791Q3KP31 576 aaPredicted RBP19.45■□□□□ 0.7
NEDD8-201ENST00000250495 C18orf63Q68DL7 685 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 ZNF585AQ6P3V2 769 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 C9orf40Q8IXQ3 194 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 DND1Q8IYX4 353 aaKnown RBP19.45■□□□□ 0.7
NEDD8-201ENST00000250495 RPRMLQ8N4K4 120 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 OR5M9Q8NGP3 310 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 MRRFQ96E11 262 aaKnown RBP19.45■□□□□ 0.7
NEDD8-201ENST00000250495 UCK2Q9BZX2 261 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 LDAHQ9H6V9 325 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 WDR41Q9HAD4 459 aa19.45■□□□□ 0.7
NEDD8-201ENST00000250495 LYARQ9NX58 379 aaKnown RBP19.45■□□□□ 0.7
NEDD8-201ENST00000250495 TUBA8Q9NY65 449 aaPredicted RBP19.45■□□□□ 0.7
NEDD8-201ENST00000250495 OTOGQ6ZRI0 2925 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 A0A096LPK6 155 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 ATP6AP2A0A1C7CYW4 349 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 AQP7O14520 342 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 KLK8O60259 260 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 ATP6AP2O75787 350 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 KLHL2O95198 593 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 TYK2P29597 1187 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 MAN2A2P49641 1150 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 HNRNPH2P55795 449 aaKnown RBP19.44■□□□□ 0.7
NEDD8-201ENST00000250495 KRTAP10-9P60411 292 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 CUL3Q13618 768 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 GTF2H2Q13888 395 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 CPSF6Q16630 551 aaKnown RBP eCLIP19.44■□□□□ 0.7
NEDD8-201ENST00000250495 GTF2H2CQ6P1K8 395 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 METTL2BQ6P1Q9 378 aaKnown RBP19.44■□□□□ 0.7
NEDD8-201ENST00000250495 CYP20A1Q6UW02 462 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 SLC29A4Q7RTT9 530 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 CCDC71Q8IV32 467 aaPredicted RBP19.44■□□□□ 0.7
NEDD8-201ENST00000250495 OR10Q1Q8NGQ4 319 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 KIF18AQ8NI77 898 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 SARAFQ96BY9 339 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 DDX31Q9H8H2 851 aaKnown RBP19.44■□□□□ 0.7
NEDD8-201ENST00000250495 IPPKQ9H8X2 491 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 SNX15Q9NRS6 342 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 ACAD8Q9UKU7 415 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.44■□□□□ 0.7
NEDD8-201ENST00000250495 HCFC1P51610 2035 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 DCHS2Q6V1P9 2916 aa19.44■□□□□ 0.7
NEDD8-201ENST00000250495 NKX2-6A6NCS4 301 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 FAM90A27PA6NNH2 459 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 OR10H2O60403 315 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 HCN1O60741 890 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 TOXO94900 526 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 IGFBP2P18065 325 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 SERPINB3P29508 390 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 PHBP35232 272 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 BSGP35613 385 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 PIGAP37287 484 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 ZNF267Q14586 743 aaPredicted RBP19.43■□□□□ 0.7
NEDD8-201ENST00000250495 UAP1Q16222 522 aaPredicted RBP19.43■□□□□ 0.7
NEDD8-201ENST00000250495 SPRED3Q2MJR0 410 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 MRM1Q6IN84 353 aaKnown RBP19.43■□□□□ 0.7
NEDD8-201ENST00000250495 SYT10Q6XYQ8 523 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 B3GNT6Q6ZMB0 384 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 DGAT2L6Q6ZPD8 337 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 ZNF572Q7Z3I7 529 aaPredicted RBP19.43■□□□□ 0.7
NEDD8-201ENST00000250495 PAQR8Q8TEZ7 354 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 RIT1Q92963 219 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 SPACA9Q96E40 222 aaPredicted RBP19.43■□□□□ 0.7
NEDD8-201ENST00000250495 CNPPD1Q9BV87 410 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 SH2D2AQ9NP31 389 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 CNIH4Q9P003 139 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 ASB4Q9Y574 426 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 LIPGQ9Y5X9 500 aa19.43■□□□□ 0.7
NEDD8-201ENST00000250495 TEP1Q99973 2627 aaKnown RBP19.43■□□□□ 0.7
NEDD8-201ENST00000250495 CCDC168Q8NDH2 2452 aa19.42■□□□□ 0.7
NEDD8-201ENST00000250495 UQCRHLA0A096LP55 91 aa19.42■□□□□ 0.7
NEDD8-201ENST00000250495 HMX2A2RU54 273 aa19.42■□□□□ 0.7
NEDD8-201ENST00000250495 HRKO00198 91 aa19.42■□□□□ 0.7
NEDD8-201ENST00000250495 FOXE1O00358 373 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms