RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SLC27A4Q6P1M0 643 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 GRASPQ7Z6J2 395 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 GALNT13Q8IUC8 556 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF557Q8N988 423 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF419Q96HQ0 510 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 ELL3Q9HB65 397 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 SLC25A37Q9NYZ2 338 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 DPP7Q9UHL4 492 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PPIEQ9UNP9 301 aaKnown RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 NCKAP1Q9Y2A7 1128 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 FAM183AA6NL82 134 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 SOCS5O75159 536 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 SRCP12931 536 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 LAG3P18627 525 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PPM1AP35813 382 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 CLK3P49761 638 aaKnown RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 NTHL1P78549 312 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 RPA4Q13156 261 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 SLC8B1Q6J4K2 584 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PAMR1Q6UXH9 720 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF367Q7RTV3 350 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 MSANTD3Q96H12 275 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 NIPSNAP1Q9BPW8 284 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 FUZQ9BT04 418 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 LOC105369274A0A096LPK9 316 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 A0A1B0GVT2 93 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PSMD9O00233 223 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 CACNB4O00305 520 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 AOC2O75106 756 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 ATF6P18850 670 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PLEKHS1Q5SXH7 462 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PTRH1Q86Y79 214 aaKnown RBP13.13□□□□□ -0.31
NFKB1-201ENST00000226574 OR4N4Q8N0Y3 316 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 CPA6Q8N4T0 437 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 CYB561A3Q8NBI2 242 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.13□□□□□ -0.316e-6■■■■■ 38.3
NFKB1-201ENST00000226574 SLC2A11Q9BYW1 496 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 MARK1Q9P0L2 795 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 MGAT4BQ9UQ53 548 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 PRELID1Q9Y255 219 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 CSNK1G3Q9Y6M4 447 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 STON1Q9Y6Q2 735 aa13.13□□□□□ -0.31
NFKB1-201ENST00000226574 AHCYP23526 432 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 GGT2P36268 569 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 MAZP56270 477 aaKnown RBP13.12□□□□□ -0.31
NFKB1-201ENST00000226574 GNG2P59768 71 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 HSF2Q03933 536 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 NKG7Q16617 165 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 MICAQ29983 383 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 INAVAQ3KP66 663 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 CCSMST1Q4G0I0 132 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 TPGS2Q68CL5 300 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 PNCKQ6P2M8 343 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 MRPL10Q7Z7H8 261 aaKnown RBP13.12□□□□□ -0.31
NFKB1-201ENST00000226574 CPPED1Q9BRF8 314 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-201ENST00000226574 PRR14Q9BWN1 585 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 RBM38Q9H0Z9 239 aaKnown RBP13.12□□□□□ -0.31
NFKB1-201ENST00000226574 MTIF3Q9H2K0 278 aaKnown RBP13.12□□□□□ -0.31
NFKB1-201ENST00000226574 RLIMQ9NVW2 624 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 COMMD9Q9P000 198 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 WASH4PA8MWX3 477 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 TEX28O15482 410 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 TAPBPO15533 448 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 NUAK1O60285 661 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 ADAM23O75077 832 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 NAA10P41227 235 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-201ENST00000226574 ACTR1BP42025 376 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 KHKP50053 298 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 ACTR1AP61163 376 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 FGFBP1Q14512 234 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 MBTPS1Q14703 1052 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 GRIN2CQ14957 1233 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 HYAL4Q2M3T9 481 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 MINDY4Q4G0A6 757 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 OLFML2AQ68BL7 652 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 ADNP2Q6IQ32 1131 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 LIN54Q6MZP7 749 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
NFKB1-201ENST00000226574 OR8K5Q8NH50 307 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 PMEPA1Q969W9 287 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 ANKMY1Q9P2S6 941 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 WDR45Q9Y484 360 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 BTAF1O14981 1849 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 A0A1W2PQ45 241 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-201ENST00000226574 A0A1W2PQY0 241 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 IRGMA1A4Y4 181 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 RAB36O95755 333 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 RHCEP18577 417 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 OR12D2P58182 307 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 DEFB115Q30KQ5 88 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 COX20Q5RI15 118 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 FCRLBQ6BAA4 426 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 ZNF563Q8TA94 476 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 WFDC5Q8TCV5 224 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 C16orf78Q8WTQ4 265 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 ITPKCQ96DU7 683 aa13.12□□□□□ -0.31
NFKB1-201ENST00000226574 CARS2Q9HA77 564 aaKnown RBP13.12□□□□□ -0.31
NFKB1-201ENST00000226574 RANGRFQ9HD47 186 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms