RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.23□□□□□ -0.13
UBE2D4-201ENST00000222402 C7orf34Q96L11 122 aa14.23□□□□□ -0.13
UBE2D4-201ENST00000222402 ASPNQ9BXN1 380 aa14.23□□□□□ -0.13
UBE2D4-201ENST00000222402 ABCB9Q9NP78 766 aa14.23□□□□□ -0.13
UBE2D4-201ENST00000222402 IFT52Q9Y366 437 aa14.23□□□□□ -0.13
UBE2D4-201ENST00000222402 PCDHGA2Q9Y5H1 932 aa14.23□□□□□ -0.13
UBE2D4-201ENST00000222402 DOCK6Q96HP0 2047 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 MLLT1Q03111 559 aaPredicted RBP14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 EIF4HQ15056 248 aaKnown RBP14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 SLC38A5Q8WUX1 472 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 TMEM80Q96HE8 168 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 ART5Q96L15 291 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 DPH7Q9BTV6 452 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 C14orf119Q9NWQ9 140 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 SPACA6W5XKT8 324 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 TRBV4-1A0A0J9YWV2 114 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 OR2A25A4D2G3 310 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 ADORA3P0DMS8 318 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 ACADMP11310 421 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 CHMP24386 653 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 CMPK1P30085 196 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 RGS1Q08116 209 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 NDUFAF5Q5TEU4 345 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 LIPKQ5VXJ0 399 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 C19orf18Q8NEA5 215 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 DIRAS2Q96HU8 199 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 WBP11Q9Y2W2 641 aaKnown RBP14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 CLDN24A6NM45 220 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 CCNKO75909 580 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 ADAP00813 363 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 HOXA9P31269 272 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 RGS6P49758 472 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 MLLT10P55197 1068 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 SYPL1Q16563 259 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 ZNF311Q5JNZ3 666 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 FAHD1Q6P587 224 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 MEX3DQ86XN8 651 aaKnown RBP14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 GATAD2AQ86YP4 633 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 CACTIN-AS1Q8N1I8 211 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 UBE2J2Q8N2K1 259 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 PLA2G15Q8NCC3 412 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 UBASH3BQ8TF42 649 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 ANKHQ9HCJ1 492 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 GPR34Q9UPC5 381 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 SLC27A6Q9Y2P4 619 aa14.22□□□□□ -0.13
UBE2D4-201ENST00000222402 FAM25AB3EWG3 89 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 FAM25CB3EWG5 89 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 FAM25GB3EWG6 89 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 FAAHO00519 579 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 CASKO14936 926 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 ENTPD6O75354 484 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 TLX1P31314 330 aaPredicted RBP14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 SLAMF1Q13291 335 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 GPM6BQ13491 265 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 SPHARQ15513 63 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 CRTC2Q53ET0 693 aaPredicted RBP14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 CCDC92Q53HC0 331 aaPredicted RBP14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 PYDC2Q56P42 97 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 TOR1AIP1Q5JTV8 583 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 C12orf40Q86WS4 652 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 TTLQ8NG68 377 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 KRCC1Q9NPI7 259 aaPredicted RBP14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 SACM1LQ9NTJ5 587 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 CXXC1Q9P0U4 656 aaPredicted RBP14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 TRIM64A6NGJ6 449 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 OR52A4PA6NMU1 304 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 WBP4O75554 376 aaKnown RBP14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 OSMP13725 252 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 PCMT1P22061 227 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 CD40LGP29965 261 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 MPIP34949 423 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 TRIQKQ629K1 86 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 OLIG3Q7RTU3 272 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 FBXL12Q9NXK8 326 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 AP1M2Q9Y6Q5 423 aa14.21□□□□□ -0.13
UBE2D4-201ENST00000222402 CPSF4LA6NMK7 179 aaKnown RBP14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 PLPP1O14494 284 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 NRG2O14511 850 aaPredicted RBP14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 CRIPAKQ8N1N5 446 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 OR4E2Q8NGC2 313 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 OR8J1Q8NGP2 316 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 ENKURQ8TC29 256 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 TANKQ92844 425 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 SMARCD2Q92925 531 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 ZDHHC5Q9C0B5 715 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 ABCG4Q9H172 646 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 RNF167Q9H6Y7 350 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 C1GALT1Q9NS00 363 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 TAAR2Q9P1P5 351 aa14.21□□□□□ -0.14
UBE2D4-201ENST00000222402 ALPPP05187 535 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 NOS3P29474 1203 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 CSTF2P33240 577 aaKnown RBP eCLIP14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 MAGEA10P43363 369 aaPredicted RBP14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 SLC15A1P46059 708 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 CD97P48960 835 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 CDK3Q00526 305 aa14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 KIAA1324Q6UXG2 1013 aaKnown RBP14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 FAM83HQ6ZRV2 1179 aaPredicted RBP14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 ZNF513Q8N8E2 541 aaPredicted RBP14.2□□□□□ -0.14
UBE2D4-201ENST00000222402 OR4K5Q8NGD3 323 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms