RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ZC3H12BQ5HYM0 836 aaKnown RBP18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 PEAR1Q5VY43 1037 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GATAD2AQ86YP4 633 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 DNAJC22Q8N4W6 341 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 DTWD2Q8NBA8 298 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SUN3Q8TAQ9 357 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 OLAHQ9NV23 265 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 PHF11Q9UIL8 331 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 FBXO4Q9UKT5 387 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 FAF1Q9UNN5 650 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SLC22A7Q9Y694 548 aa18.58■□□□□ 0.56
TNFRSF1A-201ENST00000162749 IGHV1OR21-1A0A087WYE8 117 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 A0A1B0GTQ1 180 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 MYO1GB0I1T2 1018 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 KRT75O95678 551 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NELFEP18615 380 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NTSP30990 170 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 BUD31P41223 144 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NCBP2P52298 156 aaKnown RBP eCLIP18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 OLR1P78380 273 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 DUSP2Q05923 314 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 FAM98BQ52LJ0 330 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 KANSL1Q7Z3B3 1105 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SPRED1Q7Z699 444 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 MCATQ8IVS2 390 aaKnown RBP18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GALNT15Q8N3T1 639 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 ARHGEF39Q8N4T4 335 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NEURL3Q96EH8 262 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 BBS4Q96RK4 519 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CSF3RQ99062 836 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CHID1Q9BWS9 393 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 B4GALT2O60909 372 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 PRKD3O94806 890 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 RAP2AP10114 183 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 FCGR1AP12314 374 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CEBPEQ15744 281 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 ZNF750Q32MQ0 723 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NADK2Q4G0N4 442 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 LRRC23Q53EV4 343 aaPredicted RBP18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SAXO2Q658L1 398 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GALNT10Q86SR1 603 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 ZDHHC12Q96GR4 267 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 C10orf90Q96M02 699 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 UGT2B28Q9BY64 529 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NAALAD2Q9Y3Q0 740 aa18.57■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GALR3O60755 368 aaPredicted RBP18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 C8orf89P0DMQ9 161 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CPN2P22792 545 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CHRNB3Q05901 458 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 HLA-BQ31612 363 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 C11orf65Q8NCR3 313 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 AHCYL2Q96HN2 611 aaKnown RBP18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 C9orf16Q9BUW7 83 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GRIP2Q9C0E4 1043 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NLGN3Q9NZ94 848 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 KLHL3Q9UH77 587 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 PADI4Q9UM07 663 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 ENTPD4Q9Y227 616 aa18.56■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SRPX2O60687 465 aaPredicted RBP18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 ETS2P15036 469 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 KDELR2P33947 212 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 FEN1P39748 380 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GPR3P46089 330 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GABRA4P48169 554 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NR1D2Q14995 579 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CEP68Q76N32 757 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CCDC116Q8IYX3 515 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SHISA5Q8N114 240 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SAP25Q8TEE9 199 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 ZNF681Q96N22 645 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 RAD21L1Q9H4I0 556 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 TMEM38AQ9H6F2 299 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 MS4A12Q9NXJ0 267 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 B4GAT1O43505 415 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 RASAL1O95294 804 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 H6PDO95479 791 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CFIP05156 583 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GNAO1P09471 354 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 ALPPL2P10696 532 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 PTGER1P34995 402 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 PCGF2P35227 344 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CCT3P49368 545 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 RPS26P62854 115 aaKnown RBP18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CFHR1Q03591 330 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 PRTGQ2VWP7 1150 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 C11orf91Q3C1V1 193 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 OR5T3Q8NGG3 340 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 ZFP28Q8NHY6 868 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SLC47A1Q96FL8 570 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CD180Q99467 661 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 LYRM4Q9HD34 91 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 SOHLH2Q9NX45 425 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 NDUFA13Q9P0J0 144 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 PSME2Q9UL46 239 aa18.55■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GPR179Q6PRD1 2367 aa18.54■□□□□ 0.56
TNFRSF1A-201ENST00000162749 H3BNH8 94 aa18.54■□□□□ 0.56
TNFRSF1A-201ENST00000162749 DUX1O43812 170 aa18.54■□□□□ 0.56
TNFRSF1A-201ENST00000162749 GPC1P35052 558 aa18.54■□□□□ 0.56
TNFRSF1A-201ENST00000162749 MLLT3P42568 568 aaPredicted RBP18.54■□□□□ 0.56
TNFRSF1A-201ENST00000162749 CRYBA2P53672 197 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms