RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SARGQ9BW04 601 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 FUNDC2Q9BWH2 189 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 OR51I1Q9H343 314 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 GLIPR2Q9H4G4 154 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 KLHL31Q9H511 634 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 LYARQ9NX58 379 aaKnown RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 SPHK1Q9NYA1 384 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 SCHIP1Q9P0W5 487 aaPredicted RBP7.83□□□□□ -1.16
VAMP3-201ENST00000054666 ERVK-18Q9QC07 812 aa7.83□□□□□ -1.16
VAMP3-201ENST00000054666 TRIM64BA6NI03 449 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 MAN2B1O00754 1011 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 PPM1DO15297 605 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 PCDHGA12O60330 932 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 MFN2O95140 757 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 RASGRP1O95267 797 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 APBB3O95704 486 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 AIFM1O95831 613 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 MT-ND2P03891 347 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 TFPTP0C1Z6 253 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 SLC35G6P0C7Q6 338 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 OR12D1P0DN82 309 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 CD247P20963 164 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 ATP5A1P25705 553 aaKnown RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 CERS1P27544 350 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 AKT2P31751 481 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 GP2P55259 537 aaKnown RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 CDC42P60953 191 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 PRR5P85299 388 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 TEKQ02763 1124 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 DLX2Q07687 328 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 TCEA2Q15560 299 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 DUSP7Q16829 419 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 WASH2PQ6VEQ5 465 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 DEF8Q6ZN54 512 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 ANKRD13BQ86YJ7 626 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 TRIM48Q8IWZ4 208 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 PARP8Q8N3A8 854 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 AMER3Q8N944 861 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 AQP11Q8NBQ7 271 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 OR4E2Q8NGC2 313 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 OR56A1Q8NGH5 318 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 BBS10Q8TAM1 723 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 JPH3Q8WXH2 748 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 FCGR1BQ92637 280 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 GTPBP3Q969Y2 492 aaKnown RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 GAL3ST3Q96A11 431 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 MRGPRX1Q96LB2 322 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF354BQ96LW1 612 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 COL21A1Q96P44 957 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 NIPSNAP1Q9BPW8 284 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 MAPKAP1Q9BPZ7 522 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 SRMSQ9H3Y6 488 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 C8orf33Q9H7E9 229 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 PLGRKTQ9HBL7 147 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 ACER3Q9NUN7 267 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 AASSQ9UDR5 926 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 TBC1D29Q9UFV1 150 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 KCND3Q9UK17 655 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 FBXW2Q9UKT8 454 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 DUSP12Q9UNI6 340 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 RNF6Q9Y252 685 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 PCDHGA10Q9Y5H3 936 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 SNX11Q9Y5W9 270 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 TRANK1O15050 2925 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 PRAMEF25A6NGN4 478 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 GLOD5A6NK44 160 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 MPZL2O60487 215 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 WBP4O75554 376 aaKnown RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 PRKRAO75569 313 aaKnown RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 UGT2B17O75795 530 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 OXSR1O95747 527 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 ADAP00813 363 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 ASGR2P07307 311 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF182P17025 639 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 CSNK2A2P19784 350 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 AK4P27144 223 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 HMGA2P52926 109 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 PRKAG1P54619 331 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 SMIM11AP58511 58 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 RAB8AP61006 207 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 SMN1Q16637 294 aaKnown RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 DCST1Q5T197 706 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 MRM1Q6IN84 353 aaKnown RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF425Q6IV72 752 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 CCDC71Q8IV32 467 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 OR5D16Q8NGK9 328 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 VANGL1Q8TAA9 524 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 XAGE5Q8WWM1 108 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 MYDGFQ969H8 173 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 TREX2Q9BQ50 279 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 MACROD1Q9BQ69 325 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 COPS4Q9BT78 406 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 AICDAQ9GZX7 198 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 RLIMQ9NVW2 624 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 SLC9A8Q9Y2E8 581 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 HEMK1Q9Y5R4 338 aaPredicted RBP7.82□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF780BQ9Y6R6 833 aa7.82□□□□□ -1.16
VAMP3-201ENST00000054666 CCDC88CQ9P219 2028 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 TCRBV21S2A2A0A5A6 115 aa7.81□□□□□ -1.16
VAMP3-201ENST00000054666 URADA6NGE7 173 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms