RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Brcc3P46737 291 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Slc26a1P58735 704 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Mtmr11Q3V1L6 700 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Snrnp200Q6P4T2 2136 aaKnown RBP15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vmn1r71Q8VIC0 307 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fbxo36Q9CQ24 188 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Scn8aQ9WTU3 1978 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm14139F6ZS36 494 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ccnd3P30282 292 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ptpn21Q62136 1176 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr1505Q7TQQ2 316 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr667Q7TRP4 326 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Sult2a8Q8BGL3 282 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 RhebQ921J2 184 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Npffr2Q924H0 417 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Phrf1A6H619 1682 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Topaz1E5FYH1 1653 aa15.98■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fosl1P48755 273 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pramel5Q7TPY4 500 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr1047Q8VGS0 319 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Borcs7Q9CRC6 105 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm5127Q3UQH6 212 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Q504N7 393 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Q8BHN7 327 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cacnb4Q8R0S4 519 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Dhcr24Q8VCH6 516 aaKnown RBP15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Exosc5Q9CRA8 235 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fam3aQ9D8T0 230 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Zfp808B8JJZ4 753 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Adam3F8VQ03 822 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 TifaQ793I8 184 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Adam20Q7M763 760 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rxfp3Q8BGE9 472 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 PgghgQ8BP56 690 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Padi6Q8K3V4 682 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vmn1r217Q8R270 298 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm17124F6ZIG1 213 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Itga5P11688 1053 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pdcd1Q02242 288 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ttc34Q8C0Q3 554 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vmn1r185Q8R299 319 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Acad8Q9D7B6 413 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Siglec1Q62230 1695 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr560A0A1B0GSU5 314 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm8444F6XS56 118 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Mtnd5P03921 607 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gabra3P26049 492 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 GcgP55095 180 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Doc2aQ7TNF0 405 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr525Q8VGL5 309 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Pot1Q91WC1 640 aaKnown RBP15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 SvbpQ99LQ4 66 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Izumo1Q9D9J7 397 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Slc38a3Q9DCP2 505 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Abca3Q8R420 1704 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 FpgtG5E8F4 590 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Fpr-s1O08790 351 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rab19P35294 217 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 CckbrP56481 453 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Xrcc1Q60596 631 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Unc5dQ8K1S2 956 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rab31Q921E2 194 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tas1r2Q925I4 843 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 RhagQ9QUT0 438 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Zfp14P10755 501 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Dnajc5P60904 198 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Doxl2Q6IMK7 723 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Batf2Q8R1H8 277 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr821Q8VG45 310 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr651Q8VG78 313 aa15.97■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Grin3aA2AIR5 1135 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 4931429L15RikE9PVU2 379 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rln1P47932 185 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cav3P51637 151 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Ccr3P51678 359 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 ptchd1Q14B62 888 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Xrra1Q3U3V8 786 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Srd5a1Q68FF9 255 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Spata7Q80VP2 582 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Zc3h14Q8BJ05 735 aaKnown RBP15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 HopxQ8R1H0 73 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Uba7Q9DBK7 977 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr705Q9EPF7 316 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr727A2RTN7 324 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rps3aP97351 264 aaKnown RBP15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rnf157Q3TEL6 685 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Arl11Q6P3A9 176 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr622Q8VGY7 317 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 CskP41241 450 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 ToporsQ80Z37 1033 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 MylipQ8BM54 445 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vstm5Q9D806 199 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 P33monoxQ9DBN4 303 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rp2Q9EPK2 347 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Arr3Q9EQP6 381 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Bco1Q9JJS6 566 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm4181E9Q7X3 184 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vmn1r14H3BJ46 303 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Vmn2r112L7N221 857 aa15.96■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cd3gP11942 182 aa15.96■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 78.2 ms