RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Vmn1r16K7N775 303 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Surf2P09926 257 aaKnown RBP16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 RrasP10833 218 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 PrkcaP20444 672 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Chrm4P32211 479 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cdh10P70408 788 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm45902Q3UDN3 361 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Ccdc61Q3UJV1 511 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Spata13Q5DU57 656 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Prrg3Q6PAQ9 231 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Swi5Q8K3D3 89 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Osgin1Q8VC10 478 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Clcc1Q99LI2 539 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 ItpaQ9D892 198 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Vmn1r29Q9EQ41 303 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 PalmdQ9JHU2 551 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 EefsecQ9JHW4 583 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gtf2h2Q9JIB4 396 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Pcdhgb8A0A140LI48 931 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 CtcflA2APF3 636 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Btbd16E9Q173 522 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr743L7N1Y2 311 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Stx7O70439 261 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Mtnd2P03893 345 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cxcl5P50228 132 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Sox9Q04887 507 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dusp2Q05922 318 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 OgnQ62000 298 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Pcdhac1Q91Y10 964 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Wdr73Q9CWR1 371 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Pak1ip1Q9DCE5 382 aaKnown RBP16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Prl5a1Q9JII2 230 aa16.09■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm7145A0A087WS64 360 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm6811E9Q3Y8 510 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 GzmdP11033 252 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Phxr1P15973 60 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Rin3P59729 980 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cntn2Q61330 1040 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Slc22a29Q8BWG6 551 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Atat1Q8K341 421 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Ppp1r14cQ8R4S0 164 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Tspan10Q8VCF5 331 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Erlec1Q8VEH8 483 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Olfr1208Q8VG47 308 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 AplfQ9D842 499 aa16.08■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Trav1A0A075B5Z4 110 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc37a4A0A1L1SUI3 450 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fam71f2B2RXB0 297 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Atxn2O70305 1285 aaKnown RBP16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Zfp1P08042 402 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cdc42P60766 191 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rps24P62849 133 aaKnown RBP16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 B020004J07RikQ3UTC0 476 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rbbp4Q60972 425 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cpa4Q6P8K8 420 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ffar1Q76JU9 300 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Syt14Q7TN84 555 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Mib1Q80SY4 1006 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 ReltQ8BX43 436 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Zbtb26Q8C8S0 451 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Mfsd6Q8CBH5 775 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1346Q8VGH6 313 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Dnttip1Q99LB0 328 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Q9CWU4 180 aaKnown RBP16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 3110001I22RikQ9CZ70 312 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr49Q9Z1V0 313 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ighv6-6A0A075B5T3 119 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm4924A0A1B0GR71 966 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm21885A0A286YDN8 145 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm3149E9PW52 257 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm10799F7C7U2 104 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Msl3l2G3X992 371 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm8362K7N6Y6 257 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Sp1O89090 784 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Myl12bQ3THE2 172 aaKnown RBP16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ptx4Q6RUU0 478 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Myl12aQ6ZWQ9 172 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Ostm1Q8BGT0 338 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rcc2Q8BK67 520 aaKnown RBP16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gpr152Q8BXS7 511 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 MfrpQ8K480 584 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Oard1Q8R5F3 152 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Olfr1417Q8VGJ6 315 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 BambiQ9D0L6 260 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Zfp84Q9D654 559 aa16.08■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Klhl15A2AAX3 604 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Tsga10ipF7A1F0 157 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm8897L7N294 181 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Rgs4O08899 205 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 GlrbP48168 496 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Slc37a3Q3TIT8 494 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Syne4Q8CII8 388 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Mapre2Q8R001 326 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Vmn1r18Q8R2C8 299 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Cox18Q8VC74 331 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Adarb1Q91ZS8 711 aaKnown RBP16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 PpigA2AR02 752 aaKnown RBP16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Fam181aJ3QNB7 292 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Gm2888K7N746 267 aa16.07■□□□□ 0.16
Ctcf-201ENSMUST00000005841 Bcl7cO08664 217 aa16.07■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms