RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 OR2B6P58173 313 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 LSM11P83369 360 aaKnown RBP eCLIP13.15□□□□□ -0.3
PHGDH-233ENST00000642021 RSBN1Q5VWQ0 802 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-233ENST00000642021 HIST2H2AA3Q6FI13 130 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 DPPA4Q7L190 304 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 TRAPPC5Q8IUR0 188 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 LAX1Q8IWV1 398 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 CHAC2Q8WUX2 184 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 TMEM19Q96HH6 336 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 UCK2Q9BZX2 261 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 TPK1Q9H3S4 243 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 SNTG1Q9NSN8 517 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 NFKBIL1Q9UBC1 381 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-233ENST00000642021 V9GYH0 126 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 ANKDD1BA6NHY2 528 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 HEPACAM2A8MVW5 462 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 OR10H3O60404 316 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 MFN2O95140 757 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 APOA1P02647 267 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 SRPRAP08240 638 aaKnown RBP13.15□□□□□ -0.31
PHGDH-233ENST00000642021 UQCRC2P22695 453 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 ELAVL4P26378 380 aaKnown RBP13.15□□□□□ -0.31
PHGDH-233ENST00000642021 RFX2P48378 723 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 ILKQ13418 452 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 SPHARQ15513 63 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 ZNF79Q15937 498 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 ZNF805Q5CZA5 627 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 ERAP2Q6P179 960 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 TMC5Q6UXY8 1006 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 TRMT11Q7Z4G4 463 aaKnown RBP13.15□□□□□ -0.31
PHGDH-233ENST00000642021 OR6F1Q8NGZ6 308 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 YME1L1Q96TA2 773 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 NLNQ9BYT8 704 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 IL36AQ9UHA7 158 aa13.15□□□□□ -0.31
PHGDH-233ENST00000642021 PCYT1BQ9Y5K3 369 aaPredicted RBP13.15□□□□□ -0.31
PHGDH-233ENST00000642021 PLXNA2O75051 1894 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 LINC00854A0A1B0GVQ3 168 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 TSPAN11A1L157 253 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 ARRDC5A6NEK1 342 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 PDZK1P1A8MUH7 402 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 H3BN98 237 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 SLITRK5O94991 958 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 CHRM5P08912 532 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 PIPP12273 146 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 POLR2EP19388 210 aaKnown RBP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 CD72P21854 359 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 AZGP1P25311 298 aaKnown RBP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 CSTF2P33240 577 aaKnown RBP eCLIP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 PNLIPRP1P54315 467 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 RHAGQ02094 409 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 C6orf183Q5T699 404 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 UNC5DQ6UXZ4 953 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 PARS2Q7L3T8 475 aaKnown RBP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 OLIG3Q7RTU3 272 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 COMTD1Q86VU5 262 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 ZNF547Q8IVP9 402 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 IQCF1Q8N6M8 205 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 TCEANCQ8N8B7 351 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 FBXO15Q8NCQ5 510 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 UCN3Q969E3 161 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 TP53INP1Q96A56 240 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 MVB12BQ9H7P6 319 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 SPHK2Q9NRA0 654 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 ADAP00813 363 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 RPL3P39023 403 aaKnown RBP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 SNRPGP62308 76 aaKnown RBP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 MXD1Q05195 221 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 SLX4IPQ5VYV7 408 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 LILRA6Q6PI73 481 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 TMIGD1Q6UXZ0 262 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 DEF8Q6ZN54 512 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 SLC9B2Q86UD5 537 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 UBQLNLQ8IYU4 475 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 MTERF3Q96E29 417 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 TMEM80Q96HE8 168 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 CCDC32Q9BV29 185 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 ZNF717Q9BY31 904 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-233ENST00000642021 ENOPH1Q9UHY7 261 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 ICKQ9UPZ9 632 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 TRAPPC4Q9Y296 219 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 CARD8Q9Y2G2 431 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 PRKAB1Q9Y478 270 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 C5orf42Q9H799 3197 aa13.14□□□□□ -0.31
PHGDH-233ENST00000642021 AGRPO00253 132 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 PLPP1O14494 284 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 LRRTM2O43300 516 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 SEMA3DO95025 777 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 TP53P04637 393 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-233ENST00000642021 CYP17A1P05093 508 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 TIE1P35590 1138 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 DGKGP49619 791 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 ZNF91Q05481 1191 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 PIN1Q13526 163 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-233ENST00000642021 KRR1Q13601 381 aaKnown RBP13.13□□□□□ -0.31
PHGDH-233ENST00000642021 NFE2L1Q14494 772 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 DCST1Q5T197 706 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 LIPKQ5VXJ0 399 aa13.13□□□□□ -0.31
PHGDH-233ENST00000642021 GPR65Q8IYL9 337 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms