RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 NDNQ99608 321 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 ZNF350Q9GZX5 532 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 HRH4Q9H3N8 390 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 RIMS4Q9H426 269 aaPredicted RBP-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 ACTL8Q9H568 366 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 APMAPQ9HDC9 416 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 EQTNQ9NQ60 294 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 GSN-AS1Q9NRJ2 163 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 GGA2Q9UJY4 613 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 SH3GLB1Q9Y371 365 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 PLEKHG1Q9ULL1 1385 aa-0.37□□□□□ -2.47
LMBR1-222ENST00000638959 SHANK1Q9Y566 2161 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 C7orf66A4D0T2 115 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 RNF212BA8MTL3 300 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 C17orf105B2RV13 164 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 H3BMM5 538 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 K7N7A8 449 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 PES1O00541 588 aaKnown RBP-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 DUSP11O75319 330 aaKnown RBP-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 SERPING1P05155 500 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 IDSP22304 550 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 WARSP23381 471 aaKnown RBP-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 CNTFP26441 200 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 RGS2P41220 211 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 MFAP2P55001 183 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 RAG2P55895 527 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 MAP2K1Q02750 393 aaPredicted RBP-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 GLYR1Q49A26 553 aaPredicted RBP-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 FAM219BQ5XKK7 198 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 UNC5CLQ8IV45 518 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 GCNT2Q8N0V5 402 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 FAM177A1Q8N128 213 aaPredicted RBP-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 ANKRD49Q8WVL7 239 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 ST8SIA4Q92187 359 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 CCT6BQ92526 530 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 RBM41Q96IZ5 413 aaKnown RBP-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 ELOVL4Q9GZR5 314 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 NAP1L2Q9ULW6 460 aaPredicted RBP-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 ARHGAP26Q9UNA1 814 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 YTHDF2Q9Y5A9 579 aaKnown RBP-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 PCDHGB3Q9Y5G1 929 aa-0.38□□□□□ -2.47
LMBR1-222ENST00000638959 CCDC196A0A1B0GTZ2 297 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 OR5H15A6NDH6 313 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 OR7A17O14581 309 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 MSH4O15457 936 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 TOMM70O94826 608 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 SLC2A10O95528 541 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 TIMP1P01033 207 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 CD4P01730 458 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 SNRPCP09234 159 aaKnown RBP-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 GABRB1P18505 474 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 CDH2P19022 906 aaPredicted RBP-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 CALML3P27482 149 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 HOXD10P28358 340 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 GDI1P31150 447 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 DUTP33316 252 aaKnown RBP-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 HTR3AP46098 478 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 CASP6P55212 293 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 BCL2L1Q07817 233 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 SLC39A6Q13433 755 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 RABL6Q3YEC7 729 aaPredicted RBP-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 ACER2Q5QJU3 275 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 SAXO2Q658L1 398 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 TMEM211Q6ICI0 200 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 TCEAL6Q6IPX3 200 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 PRR27Q6MZM9 219 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 UNC5DQ6UXZ4 953 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 TRPM8Q7Z2W7 1104 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 PIGWQ7Z7B1 504 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 ZNF100Q8IYN0 542 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 MOB3AQ96BX8 217 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 RAB3CQ96E17 227 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 IL4I1Q96RQ9 567 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 PELOQ9BRX2 385 aaKnown RBP-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 POLR3GLQ9BT43 218 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 TPK1Q9H3S4 243 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 IL1RL2Q9HB29 575 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 UBN1Q9NPG3 1134 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 RBAKQ9NYW8 714 aaPredicted RBP-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 RAI14Q9P0K7 980 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 PLAGL1Q9UM63 463 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 EXOC6BQ9Y2D4 811 aa-0.39□□□□□ -2.47
LMBR1-222ENST00000638959 PPIAL4EA0A075B759 164 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 TRAV24A0A0B4J272 114 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 PPIAL4CA0A0B4J2A2 164 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 PPIAL4DF5H284 164 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 G3V3Y1 287 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 EIF3FO00303 357 aaPredicted RBP-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 MLNRO43193 412 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 NPIPB7O75200 414 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 ATP6AP2O75787 350 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 OR6A2O95222 327 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 PGK1P00558 417 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 RB1P06400 928 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 RBMY1A1P0DJD3 496 aaKnown RBP-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 RBMY1CP0DJD4 496 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 PPIAL4FP0DN26 164 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 PTPN4P29074 926 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 HADHAP40939 763 aa-0.4□□□□□ -2.47
LMBR1-222ENST00000638959 TRAPPC10P48553 1259 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms