RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CPN2P22792 545 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 CERS1P27544 350 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 EPHA3P29320 983 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 SERPINB3P29508 390 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 SLC5A2P31639 672 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 IDH3AP50213 366 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 ARFIP2P53365 341 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 LIM2P55344 173 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 CLDN8P56748 225 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 RAB8AP61006 207 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 RPS15P62841 145 aaKnown RBP6.33□□□□□ -1.4
UPF3B-205ENST00000636792 MC1RQ01726 317 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 PDE7AQ13946 482 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 SQLEQ14534 574 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 NCF4Q15080 339 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 MAPRE2Q15555 327 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 CEBPEQ15744 281 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 LSM12Q3MHD2 195 aaKnown RBP6.33□□□□□ -1.4
UPF3B-205ENST00000636792 GALNTL6Q49A17 601 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 SGO1Q5FBB7 561 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 NDUFAF5Q5TEU4 345 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 GKAP1Q5VSY0 366 aaPredicted RBP6.33□□□□□ -1.4
UPF3B-205ENST00000636792 SLC48A1Q6P1K1 146 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 FAM198BQ6UWH4 519 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 ZNF793Q6ZN11 406 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 MAVSQ7Z434 540 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 CLNKQ7Z7G1 428 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 PDSS2Q86YH6 399 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 SCUBE1Q8IWY4 988 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 CA13Q8N1Q1 262 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 ZNF248Q8NDW4 579 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 OR9A4Q8NGU2 314 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 OR2Y1Q8NGV0 311 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 DNAJB8Q8NHS0 232 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 C10orf82Q8WW14 230 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 TBC1D20Q96BZ9 403 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 ERP27Q96DN0 273 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 MTFMTQ96DP5 389 aaKnown RBP6.33□□□□□ -1.4
UPF3B-205ENST00000636792 APIPQ96GX9 242 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 ART5Q96L15 291 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 C3orf30Q96M34 536 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 HBEGFQ99075 208 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 KLHL31Q9H511 634 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 AKTIPQ9H8T0 292 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 MIEF1Q9NQG6 463 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 ACSS2Q9NR19 701 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 SDR39U1Q9NRG7 319 aaPredicted RBP6.33□□□□□ -1.4
UPF3B-205ENST00000636792 SEMA3GQ9NS98 782 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 GIMAP4Q9NUV9 329 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 KCMF1Q9P0J7 381 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 FOXJ2Q9P0K8 574 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 FRRS1LQ9P0K9 344 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 C19orf25Q9UFG5 118 aaPredicted RBP6.33□□□□□ -1.4
UPF3B-205ENST00000636792 GPN3Q9UHW5 284 aaPredicted RBP6.33□□□□□ -1.4
UPF3B-205ENST00000636792 ASB4Q9Y574 426 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 AK5Q9Y6K8 562 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 CROCCQ5TZA2 2017 aa6.33□□□□□ -1.4
UPF3B-205ENST00000636792 AHCTF1Q8WYP5 2266 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 IGKV3D-11A0A0A0MRZ8 115 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 A0A0G2JND7 137 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 FAM149AA5PLN7 773 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 TRABD2BA6NFA1 517 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 E9PBE3 544 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 SGK494L7N484 410 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 CYR61O00622 381 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 GSC2O15499 205 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 CHST10O43529 356 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 TMPRSS11DO60235 418 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 KLHL41O60662 606 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 PEX11AO75192 247 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 EEDO75530 441 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 IL6P05231 212 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 JUNP05412 331 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 KLK1P06870 262 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 FHP07954 510 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 PTPN4P29074 926 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 FOLR3P41439 243 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 XCR1P46094 333 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 HNRNPFP52597 415 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 UCNP55089 124 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 HNRNPH2P55795 449 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 CLDN6P56747 220 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 PSPHP78330 225 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 RAE1P78406 368 aaKnown RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 IGLV3-21P80748 117 aaPredicted RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 PLIN5Q00G26 463 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 SLAMF1Q13291 335 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 DNASE1L3Q13609 305 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 MLC1Q15049 377 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 NKG7Q16617 165 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 SLC9B1Q4ZJI4 515 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 RFTN2Q52LD8 501 aaPredicted RBP6.32□□□□□ -1.4
UPF3B-205ENST00000636792 FAM91A1Q658Y4 838 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 CPZQ66K79 652 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 NXNQ6DKJ4 435 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 FAM71E1Q6IPT2 247 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 CGB2Q6NT52 195 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 COX15Q7KZN9 410 aa6.32□□□□□ -1.4
UPF3B-205ENST00000636792 PIGWQ7Z7B1 504 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms