RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, human

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00339-208	ENST00000634934	LRFN5	Q96NI6	719 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	RBCK1	Q9BYM8	510 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	B3GNT4	Q9C0J1	378 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934		Q9H521	79 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	CLK4	Q9HAZ1	481 aa	Known RBP	13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	LYRM4	Q9HD34	91 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	AIG1	Q9NVV5	245 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	ASIC5	Q9NY37	505 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	IFT80	Q9P2H3	777 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	PHF11	Q9UIL8	331 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	ATG4B	Q9Y4P1	393 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	ASB4	Q9Y574	426 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	AKAP10	O43572	662 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	LRAT	O95237	230 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	DLGAP3	O95886	979 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	IL3	P08700	152 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	CCNYL3	P0C7X3	344 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	RNH1	P13489	461 aa	Known RBP	13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	IDO1	P14902	403 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	XCR1	P46094	333 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	ATP4B	P51164	291 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	RAB38	P57729	211 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	STX1B	P61266	288 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	TRA2B	P62995	288 aa	Known RBP	13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	C2orf80	Q0P641	193 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	CYLC2	Q14093	348 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	ZNF385C	Q66K41	422 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	C18orf63	Q68DL7	685 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	LCN10	Q6JVE6	187 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	HACD2	Q6Y1H2	254 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	PQLC1	Q8N2U9	271 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	TMEM132C	Q8N3T6	1108 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	FAM47B	Q8NA70	645 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	FAIM2	Q9BWQ8	316 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	EFCAB1	Q9HAE3	211 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	SLC22A11	Q9NSA0	550 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	TEX10	Q9NXF1	929 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	KCMF1	Q9P0J7	381 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	MAP4K5	Q9Y4K4	846 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	PCDHGA7	Q9Y5G6	932 aa		13.62	□□□□□ -0.23
LINC00339-208	ENST00000634934	DMXL2	Q8TDJ6	3036 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934		A0A1W2PR48	441 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	FAM227A	F5H4B4	570 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	PROM1	O43490	865 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	BRINP1	O60477	761 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	PRKRA	O75569	313 aa	Known RBP	13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	BCAS2	O75934	225 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	AIFM1	O95831	613 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	TLX1	P31314	330 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	BUD31	P41223	144 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	ASMT	P46597	345 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	ALDH9A1	P49189	494 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	RTP5	Q14D33	572 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	SPATS1	Q496A3	300 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	NDUFAF5	Q5TEU4	345 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	MLIP	Q5VWP3	458 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	UNQ6494/PRO21346	Q6UXR6	183 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	COX15	Q7KZN9	410 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	TIPARP	Q7Z3E1	657 aa	Known RBP	13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	MMP21	Q8N119	569 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	MIER2	Q8N344	545 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	POU5F2	Q8N7G0	328 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	SLC26A7	Q8TE54	656 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	NXPE2	Q96DL1	559 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	SLC45A3	Q96JT2	553 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	CSF3R	Q99062	836 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	DPH2	Q9BQC3	489 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	SPRY4	Q9C004	299 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	DPY30	Q9C005	99 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	YIPF3	Q9GZM5	350 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	CHST8	Q9H2A9	424 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	WDR41	Q9HAD4	459 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	MYNN	Q9NPC7	610 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	ASCL3	Q9NQ33	180 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	MS4A12	Q9NXJ0	267 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	GPN3	Q9UHW5	284 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	PADI1	Q9ULC6	663 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	GPR45	Q9Y5Y3	372 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	COPG1	Q9Y678	874 aa	Known RBP	13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	SEC16A	O15027	2179 aa		13.61	□□□□□ -0.23
LINC00339-208	ENST00000634934	GLOD5	A6NK44	160 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	CDRT15L2	A8MXV6	281 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934		C9J4A7	227 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	STMND1	H3BQB6	276 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	B4GALT2	O60909	372 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	CDC123	O75794	336 aa	Predicted RBP	13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	BAG2	O95816	211 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	NR2F6	P10588	404 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	GSTM5	P46439	218 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	MC1R	Q01726	317 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	TNFRSF17	Q02223	184 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	OCA2	Q04671	838 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	DYNC1I2	Q13409	638 aa	Known RBP	13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	ERV3-1	Q14264	604 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	HEPACAM	Q14CZ8	416 aa		13.6	□□□□□ -0.23
LINC00339-208	ENST00000634934	LIN52	Q52LA3	116 aa		13.6	□□□□□ -0.23

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