RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 EPHA2P29317 976 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 STIP1P31948 543 aaKnown RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 CSTF2P33240 577 aaKnown RBP eCLIP2.89□□□□□ -1.95
VPS8-228ENST00000628962 OR3A3P47888 321 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 CDH11P55287 796 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 BRWD1-AS2P59051 145 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 SSTP61278 116 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 TRA2BP62995 288 aaKnown RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 RPP38P78345 283 aaKnown RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 CCZ1BP86790 482 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 CCZ1P86791 482 aaPredicted RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 DLG1Q12959 904 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 SPP2Q13103 211 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 RAPSNQ13702 412 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 GK2Q14410 553 aaPredicted RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 OPCMLQ14982 345 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 TAF13Q15543 124 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 HERC4Q5GLZ8 1057 aaPredicted RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 SLC35D3Q5M8T2 416 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 Q7L0L9 218 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 ARMCX2Q7L311 632 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 SLC16A9Q7RTY1 509 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 AMZ2Q86W34 360 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 TDHQ8IZJ6 230 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 EID3Q8N140 333 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 VPS8Q8N3P4 1428 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 PRSS35Q8N3Z0 413 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 DNAJC22Q8N4W6 341 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 SIDT2Q8NBJ9 832 aaKnown RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 OR4C15Q8NGM1 316 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 FCGR1BQ92637 280 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 RAB7BQ96AH8 199 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 C16orf58Q96GQ5 468 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 RBM41Q96IZ5 413 aaKnown RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 ZNF385AQ96PM9 386 aaKnown RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 NDNQ99608 321 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 PRMT1Q99873 361 aaKnown RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 CCDC3Q9BQI4 270 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 UBAC1Q9BSL1 405 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 TPPP3Q9BW30 176 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 MTMR12Q9C0I1 747 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 CCSER1Q9C0I3 900 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 SIRPDQ9H106 197 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 TRPV6Q9H1D0 765 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 UBTD1Q9HAC8 227 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 HOMER3Q9NSC5 361 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 ZNF701Q9NV72 531 aaPredicted RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 COPS7AQ9UBW8 275 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 MALT1Q9UDY8 824 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 NARFQ9UHQ1 456 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 POU2F3Q9UKI9 436 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 RALYQ9UKM9 306 aaKnown RBP2.89□□□□□ -1.95
VPS8-228ENST00000628962 COLEC10Q9Y6Z7 277 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 AKAP12Q02952 1782 aa2.89□□□□□ -1.95
VPS8-228ENST00000628962 MKI67P46013 3256 aaKnown RBP2.88□□□□□ -1.95
VPS8-228ENST00000628962 POLR3AO14802 1390 aaPredicted RBP2.88□□□□□ -1.95
VPS8-228ENST00000628962 CCDC7Q96M83 1385 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 LY75O60449 1722 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 A0A1W2PN81 502 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 H3BMM5 538 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 UBXN8O00124 270 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 CCL24O00175 119 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 EEF2KO00418 725 aaKnown RBP2.88□□□□□ -1.95
VPS8-228ENST00000628962 E2F3O00716 465 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 GMFGO60234 142 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 CLN5O75503 358 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 RAF1P04049 648 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 KRT6BP04259 564 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 GSTA2P09210 222 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 PDHBP11177 359 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 CETPP11597 493 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 CDH1P12830 882 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 HLA-DOBP13765 273 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 ITGA3P26006 1051 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 PBLDP30039 288 aaPredicted RBP2.88□□□□□ -1.95
VPS8-228ENST00000628962 HLA-FP30511 346 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 SRD5A2P31213 254 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 EPHX2P34913 555 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 CHRNA7P36544 502 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 KRT6CP48668 564 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 TNFSF10P50591 281 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 CLDN17P56750 224 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 KRTAP10-8P60410 259 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 PITX1P78337 314 aaPredicted RBP2.88□□□□□ -1.95
VPS8-228ENST00000628962 OVGP1Q12889 678 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 SGCGQ13326 291 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 CDH18Q13634 790 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 STX1AQ16623 288 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 KRTAP13-3Q3SY46 172 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 ZC2HC1CQ53FD0 456 aaPredicted RBP2.88□□□□□ -1.95
VPS8-228ENST00000628962 C20orf194Q5TEA3 1177 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 BSPRYQ5W0U4 402 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 CCDC73Q6ZRK6 1079 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 IL17RELQ6ZVW7 336 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 TRMT1LQ7Z2T5 733 aaKnown RBP2.88□□□□□ -1.95
VPS8-228ENST00000628962 SH2D6Q7Z4S9 175 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 PRUNE1Q86TP1 453 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 ZNF573Q86YE8 665 aa2.88□□□□□ -1.95
VPS8-228ENST00000628962 CCDC60Q8IWA6 550 aaPredicted RBP2.88□□□□□ -1.95
VPS8-228ENST00000628962 RNF148Q8N7C7 305 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms