RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TRMT11Q7Z4G4 463 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 C11orf74Q86VG3 221 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 TRAPPC5Q8IUR0 188 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 OR4K1Q8NGD4 311 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 OR9A1PQ8NGU1 263 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 C16orf78Q8WTQ4 265 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 CYB5D2Q8WUJ1 264 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 DNASE1L2Q92874 299 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 SMARCD2Q92925 531 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 MAL2Q969L2 176 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ALOXE3Q9BYJ1 711 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 TWSG1Q9GZX9 223 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ATAD3AQ9NVI7 634 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 FTSJ1Q9UET6 329 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 FAM32AQ9Y421 112 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 KCNE2Q9Y6J6 123 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 VEGFDO43915 354 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 IMPDH2P12268 514 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 TNFRSF1BP20333 461 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 TEAD1P28347 426 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 SERPINB1P30740 379 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 MAGEA8P43361 318 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 NUDT6P53370 316 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 CDC20Q12834 499 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 TDGQ13569 410 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ARHGAP19Q14CB8 494 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 SMN1Q16637 294 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 COX20Q5RI15 118 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 TMEM201Q5SNT2 666 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 PAGE2Q7Z2X7 111 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 P2RY8Q86VZ1 359 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 CCDC103Q8IW40 242 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 SMRP1Q8NCR6 262 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 FGF11Q92914 225 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 FGF14Q92915 247 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 PDXPQ96GD0 296 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 NEURL2Q9BR09 285 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 WRAP53Q9BUR4 548 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 CDCA4Q9BXL8 241 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 RSPO3Q9BXY4 272 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ZDHHC5Q9C0B5 715 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 PELI2Q9HAT8 420 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 HMG20AQ9NP66 347 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 EXOSC4Q9NPD3 245 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ZDHHC4Q9NPG8 344 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ACER3Q9NUN7 267 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 SH3GLB1Q9Y371 365 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 PCDHGA3Q9Y5H0 932 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 MN1Q10571 1320 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 GPR179Q6PRD1 2367 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 TRIOO75962 3097 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 C2CD4DB7Z1M9 353 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 CYP17A1P05093 508 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 DBTP11182 482 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ENDOUP21128 410 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ALDH9A1P49189 494 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 BCAP31P51572 246 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 PCBP4P57723 403 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 IFITM3Q01628 133 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 CYP2A13Q16696 494 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 C9orf64Q5T6V5 341 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 TMEM236Q5W0B7 351 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ZNF852Q6ZMS4 543 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 LIX1LQ8IVB5 337 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 NDNFQ8TB73 568 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 SLC38A4Q969I6 547 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 KCNC2Q96PR1 638 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 RHNO1Q9BSD3 238 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 PHF7Q9BWX1 381 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 TMEM245Q9H330 911 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 ZNF556Q9HAH1 456 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 DCAF16Q9NXF7 216 aa6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 CCDC59Q9P031 241 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-244ENST00000627109 SH3D21A4FU49 640 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 TBC1D3BA6NDS4 549 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 ZAR1LA6NP61 321 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 CLCA1A8K7I4 914 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 SLC9A3R1O14745 358 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 CD40LGP29965 261 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 RRM2P31350 389 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 OR1E2P47887 323 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 EIF2B2P49770 351 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 FBXO43Q4G163 708 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 IFI44LQ53G44 452 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 GCNT6Q5T4J0 391 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 ADAMTSL4Q6UY14 1074 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 SLC46A3Q7Z3Q1 461 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 OR4A15Q8NGL6 344 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 OR5AK3PQ8NH89 298 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 SLC5A11Q8WWX8 675 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 AP2M1Q96CW1 435 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 NEURL3Q96EH8 262 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 LRRC3BQ96PB8 259 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 TAPBPLQ9BX59 468 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 ITPAQ9BY32 194 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 SPNS1Q9H2V7 528 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 KCNK12Q9HB15 430 aa6.82□□□□□ -1.32
CTNNA1-244ENST00000627109 SLC25A19Q9HC21 320 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms