RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CLECL1Q8IZS7 167 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 DPP10Q8N608 796 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 NATD1Q8N6N6 113 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 WDR36Q8NI36 951 aaKnown RBP16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 TBC1D20Q96BZ9 403 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 MIEF2Q96C03 454 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 ROPN1LQ96C74 230 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 TAAR9Q96RI9 348 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 INPP5KQ9BT40 448 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 CADM1Q9BY67 442 aaKnown RBP16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 ULBP3Q9BZM4 244 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 GID8Q9NWU2 228 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 TAS2R1Q9NYW7 299 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 ENTPD4Q9Y227 616 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 B3GALT1Q9Y5Z6 326 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 NUP210LQ5VU65 1888 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 PTPRBP23467 1997 aa16.78■□□□□ 0.28
PTCHD3-202ENST00000622555 A0A1W2PRB8 838 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 GSC2O15499 205 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 B4GALT2O60909 372 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 KCNH1O95259 989 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 KCNK5O95279 499 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 CPSF4O95639 269 aaKnown RBP16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 C8orf89P0DMQ9 161 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 NTSP30990 170 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 DCDP81605 110 aaKnown RBP16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 TARDBPQ13148 414 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 ERV3-1Q14264 604 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 TRMT5Q32P41 509 aaKnown RBP16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 C3orf38Q5JPI3 329 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 DNAJC14Q6Y2X3 702 aaPredicted RBP16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 DHDDSQ86SQ9 333 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 TMPRSS12Q86WS5 348 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 OR4N5Q8IXE1 308 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 FAM13CQ8NE31 585 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 OR4K14Q8NGD5 310 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 TANKQ92844 425 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 CCDC115Q96NT0 180 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 BBS4Q96RK4 519 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 SERHLQ9NQF3 203 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 SLAMF8Q9P0V8 285 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 BTNL2Q9UIR0 455 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 MAN2B2Q9Y2E5 1009 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 ZNF780BQ9Y6R6 833 aa16.77■□□□□ 0.28
PTCHD3-202ENST00000622555 A0A1W2PNU3 283 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 BLACEA4D250 179 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 FAM149AA5PLN7 773 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 A8MUI8 341 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 RFXANKO14593 260 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 GYG2O15488 501 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 LDB3O75112 727 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 CDC123O75794 336 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 C6orf47O95873 294 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 FHP07954 510 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 CPOXP36551 454 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 FEN1P39748 380 aaKnown RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 LRRC74AQ0VAA2 488 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 RSPO4Q2I0M5 234 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 ZNF750Q32MQ0 723 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 NKAIN1Q4KMZ8 207 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 C16orf89Q6UX73 402 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 HACD2Q6Y1H2 254 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 ZNF595Q8IYB9 648 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 OR4A15Q8NGL6 344 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 CNRIP1Q96F85 164 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 ZBED6CLQ96FA7 236 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 OR1F2PQ96R84 312 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 PANX1Q96RD7 426 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 ZPBPQ9BS86 351 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 DDA1Q9BW61 102 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 ASPSCR1Q9BZE9 553 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 C1orf21Q9H246 121 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 SLAMF7Q9NQ25 335 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 NDE1Q9NXR1 346 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 PCDHGB4Q9UN71 923 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 SATB2Q9UPW6 733 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 CLDN4O14493 209 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 FGF17O60258 216 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 JRKO75564 520 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 ANP32DO95626 131 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 ABCB1P08183 1280 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 CSNK2A2P19784 350 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 RORAP35398 523 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 MANFP55145 182 aaKnown RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 PCBP4P57723 403 aaKnown RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 ID2Q02363 134 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 FOLH1Q04609 750 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 SLC13A2Q13183 592 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 CAPRIN1Q14444 709 aaKnown RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 ZNF385CQ66K41 422 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 COX15Q7KZN9 410 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 CACTIN-AS1Q8N1I8 211 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 LRRC58Q96CX6 371 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 SLC39A3Q9BRY0 314 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 MKKSQ9NPJ1 570 aaPredicted RBP16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 PRTFDC1Q9NRG1 225 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 SLC22A11Q9NSA0 550 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 CROTQ9UKG9 612 aa16.76■□□□□ 0.27
PTCHD3-202ENST00000622555 DMXL1Q9Y485 3027 aa16.75■□□□□ 0.27
PTCHD3-202ENST00000622555 CCDC88CQ9P219 2028 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms