RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 NPAS3Q8IXF0 933 aa12.44□□□□□ -0.42
CHD1L-210ENST00000622533 GPR65Q8IYL9 337 aa12.44□□□□□ -0.42
CHD1L-210ENST00000622533 Q8N402 240 aa12.44□□□□□ -0.42
CHD1L-210ENST00000622533 TOE1Q96GM8 510 aaKnown RBP12.44□□□□□ -0.42
CHD1L-210ENST00000622533 POLR2J2Q9GZM3 115 aaKnown RBP12.44□□□□□ -0.42
CHD1L-210ENST00000622533 TMEM245Q9H330 911 aa12.44□□□□□ -0.42
CHD1L-210ENST00000622533 C11orf16Q9NQ32 467 aa12.44□□□□□ -0.42
CHD1L-210ENST00000622533 DNAJC27Q9NZQ0 273 aa12.44□□□□□ -0.42
CHD1L-210ENST00000622533 STUB1Q9UNE7 303 aa12.44□□□□□ -0.42
CHD1L-210ENST00000622533 SSR3Q9UNL2 185 aa12.44□□□□□ -0.42
CHD1L-210ENST00000622533 C1orf226A1L170 272 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 SH3D21A4FU49 640 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 TP53P04637 393 aaPredicted RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 GALTP07902 379 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 HBQ1P09105 142 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 SDC2P34741 201 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 ALDH9A1P49189 494 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 RBBP4Q09028 425 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 SF1Q15637 639 aaKnown RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 STK11Q15831 433 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 MICAQ29983 383 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 CRTC1Q6UUV9 634 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 RNF180Q86T96 592 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 PHC2Q8IXK0 858 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 SYT14Q8NB59 555 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 OR6C4Q8NGE1 309 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 WBP2Q969T9 261 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 MARVELD3Q96A59 401 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 SCRN2Q96FV2 425 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 RBFOX1Q9NWB1 397 aaKnown RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 CLN6Q9NWW5 311 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 CNOT2Q9NZN8 540 aaKnown RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 ELF5Q9UKW6 265 aaPredicted RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 TMCC3Q9ULS5 477 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 MGAT4AQ9UM21 535 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 CXorf51AA0A1B0GTR3 108 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 FAM227AF5H4B4 570 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 GTPBP1O00178 669 aaKnown RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 YY2O15391 372 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 RFPL3O75679 317 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 NAT2P11245 290 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 LAMP1P11279 417 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 OR1D2P34982 312 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 GALEQ14376 348 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 GANABQ14697 944 aaKnown RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 KIAA1324Q6UXG2 1013 aaKnown RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 WDR53Q7Z5U6 358 aaPredicted RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 WDR20Q8TBZ3 569 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 ZNF431Q8TF32 576 aaPredicted RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 CLP1Q92989 425 aaKnown RBP12.43□□□□□ -0.42
CHD1L-210ENST00000622533 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 THSD1Q9NS62 852 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 RHCGQ9UBD6 479 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 SEC14L4Q9UDX3 406 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 PPIL1Q9Y3C6 166 aa12.43□□□□□ -0.42
CHD1L-210ENST00000622533 HYKKA2RU49 373 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 C2orf78A6NCI8 922 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 NPIPB15A6NHN6 443 aaPredicted RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 H0YIV9 168 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 RNASET2O00584 256 aaKnown RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 SEC14L5O43304 696 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 LYRM1O43325 122 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 SMAD6O43541 496 aaKnown RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 PSIP1O75475 530 aaKnown RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 IFNA14P01570 189 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 SRPRAP08240 638 aaKnown RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 HLA-EP13747 358 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 ITPKAP23677 461 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 ZNF157P51786 506 aaPredicted RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 CDC42P60953 191 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 ABATP80404 500 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 B4GALNT1Q00973 533 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 LRRC32Q14392 662 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 ZXDCQ2QGD7 858 aaPredicted RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 ZNF284Q2VY69 593 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 ATP13A5Q4VNC0 1218 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 SPIN4Q56A73 249 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 XKR6Q5GH73 641 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 DDI2Q5TDH0 399 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 PDZD3Q86UT5 571 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 TM9SF2Q99805 663 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 RACGAP1Q9H0H5 632 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 CDCP1Q9H5V8 836 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 PAK6Q9NQU5 681 aaPredicted RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 TXNL4BQ9NX01 149 aaKnown RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 LSM2Q9Y333 95 aaKnown RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 PIKFYVEQ9Y2I7 2098 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 ALDH1A1P00352 501 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 IGFBP1P08833 259 aaPredicted RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 ATP1B2P14415 290 aaPredicted RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 CTGFP29279 349 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 PFN3P60673 137 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 SNRPD1P62314 119 aaKnown RBP12.42□□□□□ -0.42
CHD1L-210ENST00000622533 PLD1Q13393 1074 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 FCN2Q15485 313 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 AANATQ16613 207 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 GRHL2Q6ISB3 625 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 OTOP2Q7RTS6 562 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 TAS1R1Q7RTX1 841 aa12.42□□□□□ -0.42
CHD1L-210ENST00000622533 TSPAN33Q86UF1 283 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms