RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 OR9Q2Q8NGE9 314 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 OR2L8Q8NGY9 312 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 SETD7Q8WTS6 366 aaKnown RBP9.96□□□□□ -0.82
VPS11-208ENST00000621676 REXO5Q96IC2 774 aaKnown RBP9.96□□□□□ -0.82
VPS11-208ENST00000621676 SHDQ96IW2 340 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 RHNO1Q9BSD3 238 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 ING2Q9H160 280 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 PNO1Q9NRX1 252 aaKnown RBP9.96□□□□□ -0.82
VPS11-208ENST00000621676 TMEM184CQ9NVA4 438 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 USP36Q9P275 1121 aaKnown RBP9.96□□□□□ -0.82
VPS11-208ENST00000621676 KIF17Q9P2E2 1029 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 ENTPD4Q9Y227 616 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 PCDHGA4Q9Y5G9 962 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 DNAJC13O75165 2243 aa9.96□□□□□ -0.82
VPS11-208ENST00000621676 GPR37L1O60883 481 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 NUDT6P53370 316 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 MLLT10P55197 1068 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 ZDHHC13Q8IUH4 622 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 OXR1Q8N573 874 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 TRPV3Q8NET8 790 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 GAL3ST4Q96RP7 486 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 AKIRIN1Q9H9L7 192 aaPredicted RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 PROS1P07225 676 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 GKN3PP0CG01 181 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 POLE2P56282 527 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 CDK6Q00534 326 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 NEDD8Q15843 81 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 FCRL6Q6DN72 434 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 OR5M10Q6IEU7 315 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 ABRAXAS1Q6UWZ7 409 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 CCDC81Q6ZN84 652 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 PAGE2Q7Z2X7 111 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 ANKFN1Q8N957 763 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 SDCCAG3Q96C92 435 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 KCNC2Q96PR1 638 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 CPPED1Q9BRF8 314 aaPredicted RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 ZNF717Q9BY31 904 aaPredicted RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 OR51I1Q9H343 314 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 GAREM1Q9H706 876 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 MVB12BQ9H7P6 319 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 NFKBIL1Q9UBC1 381 aaPredicted RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 PNMA8CA0A1B0GUJ8 204 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 EIF3FO00303 357 aaPredicted RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 CLOCKO15516 846 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 ERN1O75460 977 aaKnown RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 SNUPNO95149 360 aaKnown RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 CBLP22681 906 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 CD27P26842 260 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 RRM2P31350 389 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 ATP4BP51164 291 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 SPIBQ01892 262 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 RGS1Q08116 209 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 SMN1Q16637 294 aaKnown RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 FAM199XQ6PEV8 388 aaPredicted RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 PTOV1Q86YD1 416 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 PDSS2Q86YH6 399 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 SLC35F3Q8IY50 421 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 TAGAPQ8N103 731 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 GLB1L3Q8NCI6 653 aaPredicted RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 BPIFB6Q8NFQ5 453 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 OR4N2Q8NGD1 307 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 CREB3L4Q8TEY5 395 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 UBE2E3Q969T4 207 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 TMEM19Q96HH6 336 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 ZFYVE21Q9BQ24 234 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 VCXQ9H320 206 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 SLC35C2Q9NQQ7 365 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 TRNAU1APQ9NX07 287 aaKnown RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 KLHL42Q9P2K6 505 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 HEMK1Q9Y5R4 338 aaPredicted RBP9.95□□□□□ -0.82
VPS11-208ENST00000621676 IGF2RP11717 2491 aa9.95□□□□□ -0.82
VPS11-208ENST00000621676 C15orf38-AP3S2A0A0A6YYH1 394 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 TMEM150CB9EJG8 249 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 G3V2T6 193 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ZSCAN9O15535 394 aaPredicted RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 SUV39H1O43463 412 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 XPNPEP2O43895 674 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 FGF17O60258 216 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 FOXD2O60548 495 aaPredicted RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 ZNF217O75362 1048 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 SOX30O94993 753 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 GGT1P19440 569 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 PTPN6P29350 595 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 SSTR4P31391 388 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 CCR4P51679 360 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 LSM3P62310 102 aaKnown RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 DAB2P98082 770 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 STX4Q12846 297 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ZNF267Q14586 743 aaPredicted RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 ADRM1Q16186 407 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 AASDHQ4L235 1098 aaPredicted RBP9.94□□□□□ -0.82
VPS11-208ENST00000621676 CYBRD1Q53TN4 286 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 TRIM61Q5EBN2 209 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 FAM71E1Q6IPT2 247 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 CDC73Q6P1J9 531 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 GUSBP11Q6P575 273 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 DGAT2L6Q6ZPD8 337 aa9.94□□□□□ -0.82
VPS11-208ENST00000621676 ARPINQ7Z6K5 226 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms