RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 EXT1Q16394 746 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 Q3ZCU0 254 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 EFHC1Q5JVL4 640 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 ATF7IP2Q5U623 682 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 TTC23LQ6PF05 361 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 PHLDB2Q86SQ0 1253 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 FAM228AQ86W67 206 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 THEM5Q8N1Q8 247 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 DNAJC22Q8N4W6 341 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 ZNF383Q8NA42 475 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 MINDY2Q8NBR6 621 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 NOA1Q8NC60 698 aaKnown RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 SLC16A11Q8NCK7 471 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 SPATA4Q8NEY3 305 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 OR56B1Q8NGI3 324 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 LRRC39Q96DD0 335 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 BICC1Q9H694 974 aaKnown RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 MED20Q9H944 212 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 TREM1Q9NP99 234 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 YAE1D1Q9NRH1 226 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 FAM207AQ9NSI2 230 aaPredicted RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 KCNJ14Q9UNX9 436 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 GAB2Q9UQC2 676 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 CGNL1Q0VF96 1302 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 C15orf38-AP3S2A0A0A6YYH1 394 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 LOC100653049A0A140TA62 436 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 HELTA6NFD8 242 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 ARHGAP42A6NI28 874 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 B8ZZF3 427 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 CHUKO15111 745 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 LRRTM2O43300 516 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 ARHGEF9O43307 516 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 ATP6V1G1O75348 118 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 CBR3O75828 277 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 KRT34O76011 436 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 KRT8P05787 483 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 YES1P07947 543 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 UBTFL6P0CB48 400 aaPredicted RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 RALBP11234 206 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 CDK4P11802 303 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 CEACAM1P13688 526 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 POU2F1P14859 743 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 EZRP15311 586 aaKnown RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 LHCGRP22888 699 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 NLRP11P59045 1033 aaKnown RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 BST1Q10588 318 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 RBM39Q14498 530 aaKnown RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 ZSCAN26Q16670 478 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 PHKG1Q16816 387 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 SIRPB2Q5JXA9 342 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 TRIM65Q6PJ69 517 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 EFL1Q7Z2Z2 1120 aaKnown RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 COMTD1Q86VU5 262 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 PLD3Q8IV08 490 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 EFCAB13Q8IY85 973 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 FAM86B1Q8N7N1 296 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 SLC24A4Q8NFF2 622 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 OR52N5Q8NH56 324 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 PHLDA1Q8WV24 401 aaPredicted RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 DNAJA4Q8WW22 397 aaPredicted RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 OSTF1Q92882 214 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 SLCO4A1Q96BD0 722 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 LRRC45Q96CN5 670 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 ALS2CR12Q96Q35 445 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 BPIFA3Q9BQP9 254 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 TDRD1Q9BXT4 1180 aaKnown RBP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 FAM192AQ9GZU8 254 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 UBQLN3Q9H347 655 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 ZDHHC6Q9H6R6 413 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 DCLRE1BQ9H816 532 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.47□□□□□ -1.85
LRRC39-204ENST00000620882 ZDHHC2Q9UIJ5 367 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 TSPAN16Q9UKR8 245 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 PRELID1Q9Y255 219 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 VDAC3Q9Y277 283 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 R4GN57 208 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 NPC1L1Q9UHC9 1359 aa3.47□□□□□ -1.85
LRRC39-204ENST00000620882 SMCHD1A6NHR9 2005 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 A0A075B6Q4 140 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 FAM230AA0A1W2PPH8 454 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 CCDC162PA2VCL2 907 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 OR52A4PA6NMU1 304 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 NPIPA3F8WFD2 350 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 CLDN3O15551 220 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 XPNPEP2O43895 674 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 DFNA5O60443 496 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 PAPSS2O95340 614 aaPredicted RBP3.46□□□□□ -1.86
LRRC39-204ENST00000620882 TGM6O95932 706 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 LGI1O95970 557 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 MBD3O95983 291 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 MSH3P20585 1137 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 U2AF2P26368 475 aaKnown RBP eCLIP3.46□□□□□ -1.86
LRRC39-204ENST00000620882 POU3F4P49335 361 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 MLLT10P55197 1068 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 BTG1P62324 171 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 OTUD4Q01804 1114 aaKnown RBP3.46□□□□□ -1.86
LRRC39-204ENST00000620882 ENPEPQ07075 957 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 PDK4Q16654 411 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 PHYHD1Q5SRE7 291 aa3.46□□□□□ -1.86
LRRC39-204ENST00000620882 TTC19Q6DKK2 380 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms