RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 RELAQ04206 551 aa18.02■□□□□ 0.48
PSPC1-206ENST00000619300 IFI44LQ53G44 452 aa18.02■□□□□ 0.48
PSPC1-206ENST00000619300 ZC3H12BQ5HYM0 836 aaKnown RBP18.02■□□□□ 0.48
PSPC1-206ENST00000619300 SLC48A1Q6P1K1 146 aa18.02■□□□□ 0.48
PSPC1-206ENST00000619300 TSEN54Q7Z6J9 526 aaKnown RBP18.02■□□□□ 0.48
PSPC1-206ENST00000619300 METTL25Q8N6Q8 603 aa18.02■□□□□ 0.48
PSPC1-206ENST00000619300 SLC38A5Q8WUX1 472 aa18.02■□□□□ 0.48
PSPC1-206ENST00000619300 YTHDF1Q9BYJ9 559 aaKnown RBP18.02■□□□□ 0.48
PSPC1-206ENST00000619300 FOXQ1Q9C009 403 aa18.02■□□□□ 0.48
PSPC1-206ENST00000619300 EPB41L1Q9H4G0 881 aa18.02■□□□□ 0.48
PSPC1-206ENST00000619300 NDUFAF4Q9P032 175 aa18.02■□□□□ 0.48
PSPC1-206ENST00000619300 GOLGA4Q13439 2230 aaKnown RBP18.02■□□□□ 0.47
PSPC1-206ENST00000619300 TRIM64A6NGJ6 449 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 NDUFS2O75306 463 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 TFPTP0C1Z6 253 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 JUNDP17535 347 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 TUBA4AP68366 448 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 KCNAB2Q13303 367 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 TP53BP2Q13625 1128 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 FAM46DQ8NEK8 389 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 CNRIP1Q96F85 164 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-206ENST00000619300 MAPKAP1Q9BPZ7 522 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 GRIP2Q9C0E4 1043 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 KLHL25Q9H0H3 589 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 RUBCNLQ9H714 662 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 PDP1Q9P0J1 537 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-206ENST00000619300 RAB23Q9ULC3 237 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 PCDHGB3Q9Y5G1 929 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 FANCMQ8IYD8 2048 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 ARHGEF17Q96PE2 2063 aaPredicted RBP18.01■□□□□ 0.47
PSPC1-206ENST00000619300 TRIOO75962 3097 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 METTL12A8MUP2 240 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 C5orf58C9J3I9 102 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 SMIM10L1P0DMW3 83 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 IL9P15248 144 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 CD27P26842 260 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 LAPTM4AQ15012 233 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 NADK2Q4G0N4 442 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 DGLUCYQ7Z3D6 616 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 CYP4Z1Q86W10 505 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 DEFB119Q8N690 84 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 SMIM10Q96HG1 83 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 SHDQ96IW2 340 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 EPYCQ99645 322 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 ROGDIQ9GZN7 287 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 SEMA3GQ9NS98 782 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 WNT16Q9UBV4 365 aa18.01■□□□□ 0.47
PSPC1-206ENST00000619300 HMGN4O00479 90 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 C9P02748 559 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 PIGAP37287 484 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 LSSP48449 732 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 PXNP49023 591 aaPredicted RBP18■□□□□ 0.47
PSPC1-206ENST00000619300 DAPP51397 102 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 THAP5Q7Z6K1 395 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 ARMC8Q8IUR7 673 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 CCDC116Q8IYX3 515 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 CAMKVQ8NCB2 501 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 SUN3Q8TAQ9 357 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 BAHD1Q8TBE0 780 aaPredicted RBP18■□□□□ 0.47
PSPC1-206ENST00000619300 ZDHHC1Q8WTX9 485 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 RAB8BQ92930 207 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 ZNF347Q96SE7 839 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 NELL2Q99435 816 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 ZFYVE21Q9BQ24 234 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 LRRC61Q9BV99 259 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 YIPF3Q9GZM5 350 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 CHRDQ9H2X0 955 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 THUMPD1Q9NXG2 353 aaKnown RBP18■□□□□ 0.47
PSPC1-206ENST00000619300 TUBA8Q9NY65 449 aaPredicted RBP18■□□□□ 0.47
PSPC1-206ENST00000619300 FBXL21Q9UKT6 434 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 ENTPD4Q9Y227 616 aa18■□□□□ 0.47
PSPC1-206ENST00000619300 LOC100130705A0A1B0GUX0 176 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 URADA6NGE7 173 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 P2RX6O15547 441 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 BCHEP06276 602 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 CSNK2A2P19784 350 aaPredicted RBP17.99■□□□□ 0.47
PSPC1-206ENST00000619300 TNFRSF1BP20333 461 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 IGFBP5P24593 272 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 OR1E2P47887 323 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 CDH15P55291 814 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 HHEXQ03014 270 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 SUZ12Q15022 739 aaKnown RBP17.99■□□□□ 0.47
PSPC1-206ENST00000619300 ZNF750Q32MQ0 723 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 KDM4DQ6B0I6 523 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 TMEM64Q6YI46 380 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 RBM12BQ8IXT5 1001 aaKnown RBP17.99■□□□□ 0.47
PSPC1-206ENST00000619300 C8orf59Q8N0T1 100 aaPredicted RBP17.99■□□□□ 0.47
PSPC1-206ENST00000619300 SERHL2Q9H4I8 314 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 THSD1Q9NS62 852 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 ZCCHC3Q9NUD5 404 aaKnown RBP17.99■□□□□ 0.47
PSPC1-206ENST00000619300 EVA1BQ9NVM1 165 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 PSME2Q9UL46 239 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 MDC1Q14676 2089 aaKnown RBP17.99■□□□□ 0.47
PSPC1-206ENST00000619300 A0A087WXM4 84 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 LOC105369274A0A096LPK9 316 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 LOC102723532A0A0G2JNH3 316 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 A0A0J9YY10 115 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 SLC16A6O15403 523 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 WNT1P04628 370 aa17.99■□□□□ 0.47
PSPC1-206ENST00000619300 PVRP15151 417 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms