RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SLC16A6O15403 523 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 UGT2B11O75310 529 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 ASGR2P07307 311 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 OR12D1P0DN82 309 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 POU1F1P28069 291 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 ALDH4A1P30038 563 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 HSD17B2P37059 387 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 TNFRSF4P43489 277 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 CCT3P49368 545 aaKnown RBP11.78□□□□□ -0.52
CIITA-212ENST00000618207 HNRNPFP52597 415 aaKnown RBP11.78□□□□□ -0.52
CIITA-212ENST00000618207 NUDT6P53370 316 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 FADDQ13158 208 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 SYPL1Q16563 259 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 AHSA2Q719I0 299 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 WDR53Q7Z5U6 358 aaPredicted RBP11.78□□□□□ -0.52
CIITA-212ENST00000618207 RBM45Q8IUH3 476 aaKnown RBP11.78□□□□□ -0.52
CIITA-212ENST00000618207 LGI4Q8N135 537 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 KCT2Q8NC54 265 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 OR2L3Q8NG85 312 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 OR10G2Q8NGC3 310 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 RIPOR3Q96MK2 946 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 ZNF300Q96RE9 604 aaPredicted RBP11.78□□□□□ -0.52
CIITA-212ENST00000618207 C1QTNF7Q9BXJ2 289 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 ARMC7Q9H6L4 198 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 ANGPT4Q9Y264 503 aa11.78□□□□□ -0.52
CIITA-212ENST00000618207 NOL3O60936 208 aaKnown RBP11.77□□□□□ -0.53
CIITA-212ENST00000618207 FAM20BO75063 409 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 FADS2O95864 444 aaKnown RBP11.77□□□□□ -0.53
CIITA-212ENST00000618207 CDK4P11802 303 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 PKLRP30613 574 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 NCBP2P52298 156 aaKnown RBP eCLIP11.77□□□□□ -0.53
CIITA-212ENST00000618207 OCA2Q04671 838 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 BNIP3Q12983 259 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 SMUG1Q53HV7 270 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 TMEM236Q5W0B7 351 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 KIAA1161Q6NSJ0 714 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 CREB3L4Q8TEY5 395 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 MTERF3Q96E29 417 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 THAP11Q96EK4 314 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 OR2M4Q96R27 311 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 BBS4Q96RK4 519 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 WFDC6Q9BQY6 131 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 TIMM29Q9BSF4 260 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 YTHDF1Q9BYJ9 559 aaKnown RBP11.77□□□□□ -0.53
CIITA-212ENST00000618207 RAD21L1Q9H4I0 556 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 ZCCHC3Q9NUD5 404 aaKnown RBP11.77□□□□□ -0.53
CIITA-212ENST00000618207 ATG4BQ9Y4P1 393 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 PCDHGA12O60330 932 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 ARAFP10398 606 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 NDUFV2P19404 249 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 GPR19Q15760 415 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 RAB30Q15771 203 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 NPTX1Q15818 432 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 TOR1AIP1Q5JTV8 583 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 TMEM184AQ6ZMB5 413 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 DEF8Q6ZN54 512 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 NCCRP1Q6ZVX7 275 aaPredicted RBP11.77□□□□□ -0.53
CIITA-212ENST00000618207 IKBIPQ70UQ0 350 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 ZNF761Q86XN6 746 aaPredicted RBP11.77□□□□□ -0.53
CIITA-212ENST00000618207 SHISA5Q8N114 240 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 COL26A1Q96A83 441 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 RSPO3Q9BXY4 272 aaPredicted RBP11.77□□□□□ -0.53
CIITA-212ENST00000618207 GLIPR2Q9H4G4 154 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 SIRT3Q9NTG7 399 aaPredicted RBP11.77□□□□□ -0.53
CIITA-212ENST00000618207 NDRG2Q9UN36 371 aaKnown RBP11.77□□□□□ -0.53
CIITA-212ENST00000618207 NCKAP1Q9Y2A7 1128 aa11.77□□□□□ -0.53
CIITA-212ENST00000618207 ANHXE9PGG2 379 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 SLC28A2O43868 658 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 JRKO75564 520 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 SEMA3DO95025 777 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 EMX1Q04741 257 aaPredicted RBP11.76□□□□□ -0.53
CIITA-212ENST00000618207 EEF1A2Q05639 463 aaKnown RBP11.76□□□□□ -0.53
CIITA-212ENST00000618207 DUSP2Q05923 314 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 LASP1Q14847 261 aaKnown RBP11.76□□□□□ -0.53
CIITA-212ENST00000618207 ZNF630Q2M218 657 aaPredicted RBP11.76□□□□□ -0.53
CIITA-212ENST00000618207 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 REEP3Q6NUK4 255 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 NANOGNBQ7Z5D8 188 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 TAGAPQ8N103 731 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 OR13F1Q8NGS4 319 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 OR2L8Q8NGY9 312 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 ZCCHC10Q8TBK6 192 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 NRBF2Q96F24 287 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 ZBED6CLQ96FA7 236 aaPredicted RBP11.76□□□□□ -0.53
CIITA-212ENST00000618207 COL21A1Q96P44 957 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 APOL4Q9BPW4 351 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 SPATA9Q9BWV2 254 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 QRSL1Q9H0R6 528 aaKnown RBP11.76□□□□□ -0.53
CIITA-212ENST00000618207 SLC6A14Q9UN76 642 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 PADI2Q9Y2J8 665 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 TCRBV21S2A2A0A5A6 115 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 ADAMDEC1O15204 470 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 GADD45GO95257 159 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 ITGAMP11215 1152 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 IGFBP4P22692 258 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 LTBRP36941 435 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 PSMD7P51665 324 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 DMPKQ09013 629 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 SLC9A5Q14940 896 aa11.76□□□□□ -0.53
CIITA-212ENST00000618207 LEXMQ3ZCV2 418 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms