RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 ZNF527Q8NB42 609 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 MYO19Q96H55 970 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 CCDC88CQ9P219 2028 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 DOCK5Q9H7D0 1870 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 C19orf81C9J6K1 198 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 F5H5T6 163 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 ATG12O94817 140 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 CBX7O95931 251 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 RPS24P62847 133 aaKnown RBP13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 PPP3R1P63098 170 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 SEMA3BQ13214 749 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 LRRC37A5PQ49AS3 106 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 C9orf62Q8N4C0 152 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 MS4A15Q8N5U1 240 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 SLC22A8Q8TCC7 542 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 ZSWIM3Q96MP5 696 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 SLC35A5Q9BS91 424 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 SLC29A3Q9BZD2 475 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 KCNN2Q9H2S1 579 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 CLMPQ9H6B4 373 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 SLC39A1Q9NY26 324 aa13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 PCDHGA9Q9Y5G4 932 aaKnown RBP13.4□□□□□ -0.26
TNFRSF11A-205ENST00000616710 GMDSO60547 372 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TRAPPC2P0DI81 140 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TRAPPC2BP0DI82 140 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ETV6P41212 452 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 GINS1Q14691 196 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PCBP2Q15366 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 GCNT6Q5T4J0 391 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ATXN7L2Q5T6C5 722 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 LRRN1Q6UXK5 716 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ZNF614Q8N883 585 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IGSF8Q969P0 613 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SFXN2Q96NB2 322 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 USB1Q9BQ65 265 aaKnown RBP13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 TAS2R7Q9NYW3 318 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MGAT4CQ9UBM8 478 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 GMEB2Q9UKD1 530 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SGCEO43556 437 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 KHDRBS3O75525 346 aaKnown RBP13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 URODP06132 367 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 BUD31P41223 144 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CPT1AP50416 773 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 RHOAP61586 193 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 GPR176Q14439 515 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 RPS26P11Q5JNZ5 115 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 C3P1Q6ZMU1 363 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 LINGO2Q7L985 606 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 BBS10Q8TAM1 723 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 XAGE5Q8WWM1 108 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 NDUFAF4Q9P032 175 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ENOPH1Q9UHY7 261 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PPT2Q9UMR5 302 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 OR5F1O95221 314 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SCG5P05408 212 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 HLA-DMAP28067 261 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SCAPQ12770 1279 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MAP4K2Q12851 820 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 GPR17Q13304 367 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MICAQ29983 383 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SPOUT1Q5T280 376 aaKnown RBP13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 LAMTOR1Q6IAA8 161 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 UNC5DQ6UXZ4 953 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 KLBQ86Z14 1044 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 LMNTD1Q8N9Z9 388 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CD93Q9NPY3 652 aa13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PRDM5Q9NQX1 630 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IGKV6D-21A0A0A0MT36 114 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SLC9A3R1O14745 358 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 C6orf47O95873 294 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CDK6Q00534 326 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CBLBQ13191 982 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 NAE1Q13564 534 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 HAGHLQ6PII5 290 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ESPNLQ6ZVH7 1005 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CBLL1Q75N03 491 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 KATNB1Q9BVA0 655 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 IQCMA0A1B0GVH7 501 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PRPS2P11908 318 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 HOXA11P31270 313 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 STX4Q12846 297 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ZNF177Q13360 481 aaPredicted RBP13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 EIF4HQ15056 248 aaKnown RBP13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 CDC73Q6P1J9 531 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SERPINA13PQ6UXR4 307 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ATAD1Q8NBU5 361 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SLC6A15Q9H2J7 730 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 MIXL1Q9H2W2 232 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 HRO43593 1189 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 KCNJ13O60928 360 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 ALPPP05187 535 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 RHOCP08134 193 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 SNTB2Q13425 540 aaKnown RBP13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 PRAMEF19Q5SWL8 479 aa13.38□□□□□ -0.27
TNFRSF11A-205ENST00000616710 LYPD4Q6UWN0 246 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms