RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 NTMT1Q9BV86 223 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 MS4A7Q9GZW8 240 aaPredicted RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 MCCC2Q9HCC0 563 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 SEMA3GQ9NS98 782 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 FAM120CQ9NX05 1096 aaKnown RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 TRPC4Q9UBN4 977 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 ENOPH1Q9UHY7 261 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 ZFR2Q9UPR6 939 aaKnown RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 U3KQ87 197 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 A0A0A6YYJ9 748 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 TEX51A0A1B0GUA7 166 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 NFKBIEO00221 500 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 NME6O75414 186 aaPredicted RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 TGFB1P01137 390 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 ANXA3P12429 323 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 THPOP40225 353 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 ETV5P41161 510 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 ETV1P50549 477 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 EPHA5P54756 1037 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 PER3P56645 1201 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 HBA1P69905 142 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 MLLT1Q03111 559 aaPredicted RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 VEZF1Q14119 521 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 NTRK2Q16620 822 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 ZNF791Q3KP31 576 aaPredicted RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 GLYR1Q49A26 553 aaPredicted RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 MZT2AQ6P582 158 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 TRIM40Q6P9F5 258 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 UNC5DQ6UXZ4 953 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 CERS6Q6ZMG9 384 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 KCTD20Q7Z5Y7 419 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 C11orf96Q7Z7L8 435 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 FTMTQ8N4E7 242 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 C2orf73Q8N5S3 287 aaPredicted RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 ZNF655Q8N720 491 aaPredicted RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 NLGN2Q8NFZ4 835 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 OR2T35Q8NGX2 323 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 COQ8AQ8NI60 647 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 ASZ1Q8WWH4 475 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 FOXJ1Q92949 421 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 USP7Q93009 1102 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 NARS2Q96I59 477 aaKnown RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 MGME1Q9BQP7 344 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 TINF2Q9BSI4 451 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 NLNQ9BYT8 704 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 B3GAT2Q9NPZ5 323 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 MIEF1Q9NQG6 463 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 ACER3Q9NUN7 267 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 CNOT2Q9NZN8 540 aaKnown RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 IL17CQ9P0M4 197 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 HCN3Q9P1Z3 774 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 PLEKHB1Q9UF11 243 aaPredicted RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 UBQLN2Q9UHD9 624 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 IL20RAQ9UHF4 553 aa6.37□□□□□ -1.39
LMO3-235ENST00000616247 RUVBL1Q9Y265 456 aaKnown RBP6.37□□□□□ -1.39
LMO3-235ENST00000616247 SH3D21A4FU49 640 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 WASH4PA8MWX3 477 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 AKAP8O43823 692 aaKnown RBP6.36□□□□□ -1.39
LMO3-235ENST00000616247 IL1AP01583 271 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 BCHEP06276 602 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 RPL9P32969 192 aaKnown RBP6.36□□□□□ -1.39
LMO3-235ENST00000616247 SOX18P35713 384 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 RPL35P42766 123 aaKnown RBP6.36□□□□□ -1.39
LMO3-235ENST00000616247 ARHGDIBP52566 201 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 PRKAG1P54619 331 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 PPP3R1P63098 170 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 RHAGQ02094 409 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 DUSP4Q13115 394 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 NFATC2Q13469 925 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 PIN1Q13526 163 aaPredicted RBP6.36□□□□□ -1.39
LMO3-235ENST00000616247 EXOSC2Q13868 293 aaKnown RBP6.36□□□□□ -1.39
LMO3-235ENST00000616247 DOC2AQ14183 400 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 TRIM71Q2Q1W2 868 aaKnown RBP6.36□□□□□ -1.39
LMO3-235ENST00000616247 BRAT1Q6PJG6 821 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 HSDL2Q6YN16 418 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 OLIG3Q7RTU3 272 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 RBM45Q8IUH3 476 aaKnown RBP6.36□□□□□ -1.39
LMO3-235ENST00000616247 C9orf62Q8N4C0 152 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 SAMD12Q8N8I0 201 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 KAT2AQ92830 837 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 PPCDCQ96CD2 204 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 FERD3LQ96RJ6 166 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 B3GNT4Q9C0J1 378 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 MAGEH1Q9H213 219 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 ERVMER34-1Q9H9K5 563 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 IL26Q9NPH9 171 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 ADAM30Q9UKF2 790 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 BAIAP2Q9UQB8 552 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 PCDHB7Q9Y5E2 793 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 MYLKQ15746 1914 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 CCDC88CQ9P219 2028 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 TEX13CA0A0J9YWL9 993 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 IQCMA0A1B0GVH7 501 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 A0A1W2PPK0 400 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 OR2AG2A6NM03 316 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 M0R233 179 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 LGALS8O00214 317 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 ZNF197O14709 1029 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 TNFRSF10BO14763 440 aa6.36□□□□□ -1.39
LMO3-235ENST00000616247 SHOXO15266 292 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms