RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 SF3B4Q15427 424 aaKnown RBP eCLIP10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 TIGD6Q17RP2 521 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 IQCCQ4KMZ1 466 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 ZRANB3Q5FWF4 1079 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 FBXO48Q5FWF7 155 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 PRAMEF14Q5SWL7 426 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 MACC1Q6ZN28 852 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 CCDC81Q6ZN84 652 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 USP30Q70CQ3 517 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 ZNF367Q7RTV3 350 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 THNSL2Q86YJ6 484 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 ENTHD1Q8IYW4 607 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 RBFAQ8N0V3 343 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 METTL4Q8N3J2 472 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 PARP16Q8N5Y8 322 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 APH1BQ8WW43 257 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 ESAMQ96AP7 390 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 ELF4Q99607 663 aaPredicted RBP10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 ORAI3Q9BRQ5 295 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 CLPBQ9H078 707 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 RSPH9Q9H1X1 276 aaPredicted RBP10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 FAM120CQ9NX05 1096 aaKnown RBP10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 FBXL12Q9NXK8 326 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 KIF17Q9P2E2 1029 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 SLCO3A1Q9UIG8 710 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 STOML2Q9UJZ1 356 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 SCML1Q9UN30 329 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 SNX6Q9UNH7 406 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 SAMHD1Q9Y3Z3 626 aaKnown RBP10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 PCDHGB6Q9Y5F9 930 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 PCDHGA6Q9Y5G7 932 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 RAI2Q9Y5P3 530 aa10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 MUC22E2RYF6 1773 aaPredicted RBP10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 HELZ2Q9BYK8 2649 aaKnown RBP10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 COL5A1P20908 1838 aaPredicted RBP10.58□□□□□ -0.72
RABGAP1-213ENST00000616002 TRBV5-4A0A0C4DH59 114 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 RFXANKO14593 260 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 DSCR3O14972 297 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ATXN7O15265 892 aaPredicted RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ZW10O43264 779 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 TBX1O43435 398 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 OR1I1O60431 355 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 MPZL2O60487 215 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 KRT75O95678 551 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 LATS1O95835 1130 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 DLGAP3O95886 979 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 PIRTP0C851 137 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 MYCLP1P12525 358 aaPredicted RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ARL1P40616 181 aaPredicted RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 EIF2S3P41091 472 aaKnown RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 RPS5P46782 204 aaKnown RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 HSPA7P48741 367 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ARRB1P49407 418 aaPredicted RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ST8SIA6P61647 398 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 LSM3P62310 102 aaKnown RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 CSTF3Q12996 717 aaKnown RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 DGCR6Q14129 220 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 SPANXN2Q5MJ10 180 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 COX20Q5RI15 118 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 NADSYN1Q6IA69 706 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ERAP2Q6P179 960 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 CCBE1Q6UXH8 406 aaPredicted RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 GDPD3Q7L5L3 318 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 LRRC70Q7Z2Q7 622 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ZZZ3Q8IYH5 903 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 UBQLNLQ8IYU4 475 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 PHACTR4Q8IZ21 702 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 C1orf52Q8N6N3 182 aaKnown RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 L3MBTL4Q8NA19 623 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ATG16L2Q8NAA4 619 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 OR8J2Q8NGG1 315 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ULK4Q96C45 1275 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 C7orf34Q96L11 122 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 SLC6A18Q96N87 628 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 CDCA4Q9BXL8 241 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 SYNDIG1Q9H7V2 258 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 CNOT2Q9NZN8 540 aaKnown RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 ABCG2Q9UNQ0 655 aa10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 FLNBO75369 2602 aaKnown RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 TP53BP1Q12888 1972 aaPredicted RBP10.57□□□□□ -0.72
RABGAP1-213ENST00000616002 SETXQ7Z333 2677 aaKnown RBP10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 SLC35F4A4IF30 521 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 LRRC72A6NJI9 287 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 CBX4O00257 560 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 SMAD7O15105 426 aaKnown RBP10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 ADAMDEC1O15204 470 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 CAPN5O15484 640 aaPredicted RBP10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 YKT6O15498 198 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 MAN1A2O60476 641 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 ACSL4O60488 711 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 STK16O75716 305 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 LCKP06239 509 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 CD38P28907 300 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 CD70P32970 193 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 DDOSTP39656 456 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 CLDN6P56747 220 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 TARDBPQ13148 414 aaKnown RBP eCLIP10.56□□□□□ -0.721e-7■■■■□ 25.2
RABGAP1-213ENST00000616002 SLC13A2Q13183 592 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 GTF2H3Q13889 308 aa10.56□□□□□ -0.72
RABGAP1-213ENST00000616002 GPR33Q49SQ1 333 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms