RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 C2CD4DB7Z1M9 353 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 TNFRSF10CO14798 259 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC30A4O14863 429 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 SCO2O43819 266 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 PER3P56645 1201 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 ITGADQ13349 1161 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 TLDC1Q6P9B6 456 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 Q6ZNB5 142 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 LAPTM4BQ86VI4 370 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 OR4N5Q8IXE1 308 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 NEK7Q8TDX7 302 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 HIST1H2AAQ96QV6 131 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 IRF2BPLQ9H1B7 796 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 CD320Q9NPF0 282 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 NME7Q9Y5B8 376 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 CD2P06729 351 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 ZNF888P0CJ79 500 aaPredicted RBP9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 EMP2P54851 167 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 CD47Q08722 323 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 MYBPC3Q14896 1274 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 COLEC12Q5KU26 742 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 CROCCP3Q8IVE0 287 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 OR6N1Q8NGY5 312 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 RNASE11Q8TAA1 199 aaKnown RBP9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 TANKQ92844 425 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 TMBIM1Q969X1 311 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 HOXD1Q9GZZ0 328 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 TMEM168Q9H0V1 697 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 EBF2Q9HAK2 575 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 PLGRKTQ9HBL7 147 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 CMTM6Q9NX76 183 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 MRPS7Q9Y2R9 242 aaKnown RBP9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 YBX2Q9Y2T7 364 aaKnown RBP9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 DAPL1A0PJW8 107 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 BLACEA4D250 179 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 EFCAB9A8MZ26 197 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 AP1G1O43747 822 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 PGCP20142 388 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC6A6P31641 620 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 HK3P52790 923 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 AFMIDQ63HM1 303 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 HACD2Q6Y1H2 254 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 TMEM151BQ8IW70 566 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 SDR16C5Q8N3Y7 309 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 KIAA1958Q8N8K9 716 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 AGBL5Q8NDL9 886 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 PROKR2Q8NFJ6 384 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 THAP3Q8WTV1 239 aaPredicted RBP9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 APIPQ96GX9 242 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 NODALQ96S42 347 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 CCDC106Q9BWC9 280 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 SESN1Q9Y6P5 492 aa9.01□□□□□ -0.97
CLTCL1-208ENST00000615606 P04436 131 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 IFI30P13284 250 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 CCR2P41597 374 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 KCNJ5P48544 419 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 ADPRHP54922 357 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 PPP3R1P63098 170 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 PRDX1Q06830 199 aaKnown RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 ELOAQ14241 798 aaKnown RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 BCL7AQ4VC05 210 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 CLEC12AQ5QGZ9 265 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 GPR107Q5VW38 600 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 LILRA6Q6PI73 481 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 ATG14Q6ZNE5 492 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 PPP1R3BQ86XI6 285 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 PHF6Q8IWS0 365 aaKnown RBP eCLIP9□□□□□ -0.97
CLTCL1-208ENST00000615606 IPCEF1Q8WWN9 437 aaPredicted RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 FKBP10Q96AY3 582 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 MOCOSQ96EN8 888 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 ADAMTS6Q9UKP5 1117 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 SPATA2Q9UM82 520 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 MGAT4BQ9UQ53 548 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 MYOCOSA0A1B0GUC4 107 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 PRRT4C9JH25 899 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 SRPX2O60687 465 aaPredicted RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 CERS1P27544 350 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 HTR1EP28566 365 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 TRA2BP62995 288 aaKnown RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 ADAM15Q13444 863 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 ZSWIM7Q19AV6 140 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 OTUD1Q5VV17 481 aaPredicted RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 CARM1Q86X55 608 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 AURKBQ96GD4 344 aaPredicted RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 TCTN2Q96GX1 697 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 SLC6A18Q96N87 628 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 GAREM1Q9H706 876 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 TIGARQ9NQ88 270 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 CLEC4EQ9ULY5 219 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 TNS1Q9HBL0 1735 aaKnown RBP9□□□□□ -0.97
CLTCL1-208ENST00000615606 A0A1W2PRG6 482 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 CYB5AP00167 134 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 TACSTD2P09758 323 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 AHRP35869 848 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 PGFP49763 221 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 CASP6P55212 293 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 RCAN2Q14206 197 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 TAB1Q15750 504 aa9□□□□□ -0.97
CLTCL1-208ENST00000615606 UGT3A2Q3SY77 523 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms