RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 IQCKQ8N0W5 287 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 FANK1Q8TC84 345 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 DCBLD2Q96PD2 775 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR1F2PQ96R84 312 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 NPLQ9BXD5 320 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 KATNBL1Q9H079 304 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 KIR3DX1Q9H7L2 352 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 ATP13A2Q9NQ11 1180 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 GALPQ9UBC7 116 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 ACAD8Q9UKU7 415 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 SLC6A5Q9Y345 797 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 TMEM14AQ9Y6G1 99 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 TCRBV7S3A2A0A539 114 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 HTR3EA5X5Y0 456 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 C2CD4DB7Z1M9 353 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 LOC110117498-PIK3R3F6TDL0 507 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 FAAHO00519 579 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 NUAK1O60285 661 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR1I1O60431 355 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF821O75541 412 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 HRGP04196 525 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 C8BP07358 591 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 DCKP27707 260 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 HMGCS1Q01581 520 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 TGFBR3Q03167 851 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 CDKN3Q16667 212 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 MEDAGQ5VYS4 303 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 KCTD18Q6PI47 426 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 LAPTM4BQ86VI4 370 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 PAPD5Q8NDF8 572 aaKnown RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR5K2Q8NHB8 316 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 PIK3R3Q92569 461 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 DPH2Q9BQC3 489 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 POLDIP3Q9BY77 421 aaKnown RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 RNF38Q9H0F5 515 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 SEMA6CQ9H3T2 930 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 SEC61A2Q9H9S3 476 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 RNPEPL1Q9HAU8 725 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 CDH20Q9HBT6 801 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 S100A14Q9HCY8 104 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 TESMINQ9Y4I5 508 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 A0A1W2PP18 115 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 A0A1W2PPL8 197 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 RBMXL2O75526 392 aaKnown RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZMPSTE24O75844 475 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 ANGPTL1O95841 491 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 C9P02748 559 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 PGRP06401 933 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 HOXB9P17482 250 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 NR1H2P55055 460 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 VLDLRP98155 873 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 PCDH1Q08174 1060 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 KLF1Q13351 362 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 MED22Q15528 200 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 PQLC1Q8N2U9 271 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 YIPF4Q9BSR8 244 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 SPHK1Q9NYA1 384 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 RGPD3A6NKT7 1758 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 A0A0U1RQJ8 604 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 KLRC4-KLRK1H3BQV0 150 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SCO2O43819 266 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 CSTBP04080 98 aaKnown RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF12P17014 697 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 PSMA1P25786 263 aaKnown RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 DAP3P51398 398 aaKnown RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF140P52738 457 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SHC2P98077 582 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 CEP97Q8IW35 865 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 UEVLDQ8IX04 471 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 IFI44Q8TCB0 444 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 EDEM2Q9BV94 578 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 MTHFD2LQ9H903 347 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SALL4Q9UJQ4 1053 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 UNC119BA6NIH7 251 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 E7ESA3 106 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 HAT1O14929 419 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 RFPL3O75679 317 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 HLA-FP30511 346 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ACTC1P68032 377 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ACTA1P68133 377 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 HYAL2Q12891 473 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 TRA2AQ13595 282 aaKnown RBP eCLIP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 DOC2AQ14183 400 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 CLCA4Q14CN2 919 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 IQCCQ4KMZ1 466 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 KANK2Q63ZY3 851 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ASTLQ6HA08 431 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 HMBOX1Q6NT76 420 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 EPGNQ6UW88 154 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZDHHC24Q6UX98 284 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZCCHC7Q8N3Z6 543 aaKnown RBP9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 KAT2AQ92830 837 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 PYURFQ96I23 114 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 COX4I2Q96KJ9 171 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 LOXHD1Q8IVV2 1947 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 RAB36O95755 333 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 C8orf89P0DMQ9 161 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 GADD45AP24522 165 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 TPRG1LQ5T0D9 272 aa9.3□□□□□ -0.92
TNFRSF9-204ENST00000615230 SWT1Q5T5J6 900 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms