RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 KBTBD12Q3ZCT8 623 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 DEPDC1Q5TB30 811 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 KHDRBS2Q5VWX1 349 aaKnown RBP16.44■□□□□ 0.22
SSBP1-215ENST00000612337 OR4C11Q6IEV9 310 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 TRILQ7L0X0 811 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 CMC1Q7Z7K0 106 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 TBC1D1Q86TI0 1168 aaPredicted RBP16.44■□□□□ 0.22
SSBP1-215ENST00000612337 CDH24Q86UP0 819 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 FAM109AQ8N4B1 249 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 TMEM251Q8N6I4 163 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 PPM1NQ8N819 430 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 SPATA4Q8NEY3 305 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 OR5M3Q8NGP4 307 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 NUBPLQ8TB37 319 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 SMC6Q96SB8 1091 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 UCK2Q9BZX2 261 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 KCNJ16Q9NPI9 418 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 NPDC1Q9NQX5 325 aaPredicted RBP16.44■□□□□ 0.22
SSBP1-215ENST00000612337 PNPLA3Q9NST1 481 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 MS4A12Q9NXJ0 267 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 ADGRE2Q9UHX3 823 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 LIPGQ9Y5X9 500 aa16.44■□□□□ 0.22
SSBP1-215ENST00000612337 A0A1B0GVC2 190 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 NKX2-6A6NCS4 301 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 FAM90A27PA6NNH2 459 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 FOXO6A8MYZ6 492 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 UBXN8O00124 270 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 SAP18O00422 153 aaKnown RBP16.43■□□□□ 0.22
SSBP1-215ENST00000612337 BCKDKO14874 412 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 FAM155BO75949 473 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 TOXO94900 526 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 IGKV3-11P04433 115 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 P04436 131 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 ACVR2AP27037 513 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 MSX1P28360 303 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 MAGEA5P43359 124 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 SLAMF1Q13291 335 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 SLMAPQ14BN4 828 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 PIGGQ5H8A4 983 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 GRHL2Q6ISB3 625 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 FAM47EQ6ZV65 393 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 CCDC71Q8IV32 467 aaPredicted RBP16.43■□□□□ 0.22
SSBP1-215ENST00000612337 OR5M9Q8NGP3 310 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 SENP5Q96HI0 755 aaPredicted RBP16.43■□□□□ 0.22
SSBP1-215ENST00000612337 DGAT2Q96PD7 388 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 SORBS1Q9BX66 1292 aaKnown RBP16.43■□□□□ 0.22
SSBP1-215ENST00000612337 OR51B5Q9H339 312 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 RPF2Q9H7B2 306 aaKnown RBP16.43■□□□□ 0.22
SSBP1-215ENST00000612337 IGSF5Q9NSI5 407 aa16.43■□□□□ 0.22
SSBP1-215ENST00000612337 SETD2Q9BYW2 2564 aaPredicted RBP16.43■□□□□ 0.22
SSBP1-215ENST00000612337 FIGNL2A6NMB9 653 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 DYRK3O43781 588 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 LTA4HP09960 611 aaKnown RBP16.42■□□□□ 0.22
SSBP1-215ENST00000612337 CCL3P10147 92 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 EPB42P16452 691 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 STX2P32856 288 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 PIK3CBP42338 1070 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 DNASE1L1P49184 302 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 PLTPP55058 493 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 CAV1Q03135 178 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 ASPHQ12797 758 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 TESK1Q15569 626 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 OR4N5Q8IXE1 308 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 C9orf40Q8IXQ3 194 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 HUS1BQ8NHY5 278 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 TANKQ92844 425 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 RGMAQ96B86 450 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 RBM18Q96H35 190 aaKnown RBP16.42■□□□□ 0.22
SSBP1-215ENST00000612337 ART5Q96L15 291 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 CENPKQ9BS16 269 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 SH2D2AQ9NP31 389 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 TUBA8Q9NY65 449 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-215ENST00000612337 PHF11Q9UIL8 331 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 TSC22D4Q9Y3Q8 395 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 ATG4BQ9Y4P1 393 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 MTORP42345 2549 aa16.42■□□□□ 0.22
SSBP1-215ENST00000612337 SYCE1LA8MT33 242 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 AQP7O14520 342 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 SUSD5O60279 629 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 MTHFD2P13995 350 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 TLX1P31314 330 aaPredicted RBP16.41■□□□□ 0.22
SSBP1-215ENST00000612337 MAGEA4P43358 317 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 RAP1GDS1P52306 607 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 ARFIP1P53367 373 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 PLIN5Q00G26 463 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 TNFRSF17Q02223 184 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 FOLH1Q04609 750 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 C2orf54Q08AI8 447 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 NAB1Q13506 487 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 DDX39BQ13838 428 aaKnown RBP16.41■□□□□ 0.22
SSBP1-215ENST00000612337 SLC10A1Q14973 349 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 ZNF791Q3KP31 576 aaPredicted RBP16.41■□□□□ 0.22
SSBP1-215ENST00000612337 ZNF585AQ6P3V2 769 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 GPR180Q86V85 440 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 DMRTC2Q8IXT2 367 aaPredicted RBP16.41■□□□□ 0.22
SSBP1-215ENST00000612337 ZCCHC7Q8N3Z6 543 aaKnown RBP16.41■□□□□ 0.22
SSBP1-215ENST00000612337 RNF175Q8N4F7 328 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 SLC15A4Q8N697 577 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 TEX9Q8N6V9 391 aa16.41■□□□□ 0.22
SSBP1-215ENST00000612337 RHEBL1Q8TAI7 183 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms