RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SLC16A5O15375 505 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 OR12D1P0DN82 309 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 RAB25P57735 213 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 SLAMF1Q13291 335 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 ZNF750Q32MQ0 723 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 GLCCI1Q86VQ1 547 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 PGBD3Q8N328 593 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 OXR1Q8N573 874 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 AMER3Q8N944 861 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 OR56A3Q8NH54 315 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 IRF7Q92985 503 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 ARSGQ96EG1 525 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 PHOX2BQ99453 314 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 ZSCAN5AQ9BUG6 496 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 KLHL3Q9UH77 587 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 SPIN1Q9Y657 262 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 MYL12BO14950 172 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 TMCC2O75069 709 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 KRT75O95678 551 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 OLFM2O95897 454 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 PSMA1P25786 263 aaKnown RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 OLR1P78380 273 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 CD83Q01151 205 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 HNRNPA0Q13151 305 aaKnown RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 PARS2Q7L3T8 475 aaKnown RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 SFTPA1Q8IWL2 248 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 KREMEN2Q8NCW0 462 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 SLC5A11Q8WWX8 675 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 TSSK6Q9BXA6 273 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 UCK2Q9BZX2 261 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 BHLHE41Q9C0J9 482 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 CCDC177Q9NQR7 707 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 CFL2Q9Y281 166 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 MYO15AQ9UKN7 3530 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 A0A1W2PQ09 198 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 SLC5A10A0PJK1 596 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 ISPDA4D126 451 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 CSO75390 466 aaKnown RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 HBQ1P09105 142 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 SYN1P17600 705 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 UGT2B10P36537 528 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 BUD31P41223 144 aaPredicted RBP13.37□□□□□ -0.27
COL6A1-207ENST00000612273 TCEAL5Q5H9L2 206 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 ATAT1Q5SQI0 421 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 REEP3Q6NUK4 255 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 ATCAYQ86WG3 371 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 SLC43A3Q8NBI5 491 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 FAM46DQ8NEK8 389 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 GPR32P1Q8NGA4 272 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 SLC7A13Q8TCU3 470 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 DIRAS2Q96HU8 199 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 TXNDC15Q96J42 360 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 ART5Q96L15 291 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 BRF2Q9HAW0 419 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 COMMD3Q9UBI1 195 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 ZNF221Q9UK13 617 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 N6AMT1Q9Y5N5 214 aa13.37□□□□□ -0.27
COL6A1-207ENST00000612273 H3BQ06 376 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-207ENST00000612273 RECKO95980 971 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 IFNA14P01570 189 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 HOXB6P17509 224 aaKnown RBP13.36□□□□□ -0.27
COL6A1-207ENST00000612273 CBLP22681 906 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 ALDH6A1Q02252 535 aaKnown RBP13.36□□□□□ -0.27
COL6A1-207ENST00000612273 TCTN3Q6NUS6 607 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 IL17RDQ8NFM7 739 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 GATAD2BQ8WXI9 593 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 KLK6Q92876 244 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 ZSWIM3Q96MP5 696 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 CPEB1Q9BZB8 566 aaKnown RBP13.36□□□□□ -0.27
COL6A1-207ENST00000612273 OSGEPL1Q9H4B0 414 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 RC3H2Q9HBD1 1191 aaKnown RBP13.36□□□□□ -0.27
COL6A1-207ENST00000612273 DYRK4Q9NR20 520 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 PLCXD1Q9NUJ7 323 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 TEX10Q9NXF1 929 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-207ENST00000612273 MOSPD1Q9UJG1 213 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 TBC1D24Q9ULP9 559 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 SCN8AQ9UQD0 1980 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 UGDHO60701 494 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 PTTG1O95997 202 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 NR2F1P10589 423 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 SDHBP21912 280 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 ZNF91Q05481 1191 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 INSL4Q14641 139 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 FBXO43Q4G163 708 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 ATAD3CQ5T2N8 411 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 C1QTNF12Q5T7M4 302 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 FAM83HQ6ZRV2 1179 aaPredicted RBP13.36□□□□□ -0.27
COL6A1-207ENST00000612273 TRAM1L1Q8N609 369 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 FCRL1Q96LA6 429 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 FYTTD1Q96QD9 318 aaKnown RBP13.36□□□□□ -0.27
COL6A1-207ENST00000612273 CTRCQ99895 268 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 XKR8Q9H6D3 395 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 IL36AQ9UHA7 158 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 NUFIP1Q9UHK0 495 aaKnown RBP13.36□□□□□ -0.27
COL6A1-207ENST00000612273 EYSQ5T1H1 3165 aa13.36□□□□□ -0.27
COL6A1-207ENST00000612273 PRKYO43930 277 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 LATS1O95835 1130 aa13.35□□□□□ -0.27
COL6A1-207ENST00000612273 RHCEP18577 417 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms