RNA–Protein interactions for RNA: ENST00000607055.1

NECAB3-221, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 4

Gene NECAB3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-221ENST00000607055 C8orf89P0DMQ9 161 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 PPP2R1BP30154 601 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 HPCAL1P37235 193 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 NME5P56597 212 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 RPS6KA2Q15349 733 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 LRRC69Q6ZNQ3 347 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 SPATA21Q7Z572 469 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 KRTCAP2Q8N6L1 136 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 EXOSC8Q96B26 276 aaKnown RBP20.3■□□□□ 0.84
NECAB3-221ENST00000607055 KLHL29Q96CT2 875 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 MESP1Q9BRJ9 268 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 REEP4Q9H6H4 257 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 UTS2RQ9UKP6 389 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 CES1P1Q9UKY3 287 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 PSME2Q9UL46 239 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 GPR45Q9Y5Y3 372 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 CCDC88CQ9P219 2028 aa20.3■□□□□ 0.84
NECAB3-221ENST00000607055 IGKV3D-11A0A0A0MRZ8 115 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 SHOX2O60902 331 aaPredicted RBP20.29■□□□□ 0.84
NECAB3-221ENST00000607055 ERAL1O75616 437 aaKnown RBP20.29■□□□□ 0.84
NECAB3-221ENST00000607055 GPR75O95800 540 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 FURINP09958 794 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 IDO1P14902 403 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 MMP11P24347 488 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 PIK3R1P27986 724 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 CLDN8P56748 225 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 FOXK2Q01167 660 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 GSTA3Q16772 222 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 BROXQ5VW32 411 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 ANKRD26P1Q6NSI1 321 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 PPP1R32Q7Z5V6 425 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 ANKRD37Q7Z713 158 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 RAB43Q86YS6 212 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 FAM9CQ8IZT9 166 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 OR4K14Q8NGD5 310 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 C10orf82Q8WW14 230 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 C8orf44Q96CB5 159 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 ALOXE3Q9BYJ1 711 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 DPY30Q9C005 99 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 EPN3Q9H201 632 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 EHD3Q9NZN3 535 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 CLDN16Q9Y5I7 305 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 HS3ST3B1Q9Y662 390 aa20.29■□□□□ 0.84
NECAB3-221ENST00000607055 TCRBV16S1A1N1A0A5B0 115 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 CDC14CA4D256 554 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 ZNF891A8MT65 544 aaPredicted RBP20.28■□□□□ 0.84
NECAB3-221ENST00000607055 SCAMP2O15127 329 aaKnown RBP20.28■□□□□ 0.84
NECAB3-221ENST00000607055 NKX2-8O15522 239 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 EFSO43281 561 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 PRKAR1AP10644 381 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 NCF2P19878 526 aaPredicted RBP20.28■□□□□ 0.84
NECAB3-221ENST00000607055 PRPS1L1P21108 318 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 EEF1A2Q05639 463 aaKnown RBP20.28■□□□□ 0.84
NECAB3-221ENST00000607055 SERTAD2Q14140 314 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 UGT8Q16880 541 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 ZNF750Q32MQ0 723 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 ATP1A1-AS1Q5TC04 95 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 FAM180BQ6P0A1 224 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 TMEM205Q6UW68 189 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 NUDT8Q8WV74 236 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 PPCDCQ96CD2 204 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 BRINP2Q9C0B6 783 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 C19orf25Q9UFG5 118 aaPredicted RBP20.28■□□□□ 0.84
NECAB3-221ENST00000607055 TRIM33Q9UPN9 1127 aa20.28■□□□□ 0.84
NECAB3-221ENST00000607055 IGF2RP11717 2491 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 IGHV3-20A0A0C4DH32 117 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 A0A1W2PS29 197 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 A8MUA0 341 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 SOCS6O14544 535 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 ANKRD28O15084 1053 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 IFNA16P05015 189 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 COX7A2P14406 83 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 RPL3P39023 403 aaKnown RBP20.27■□□□□ 0.84
NECAB3-221ENST00000607055 XKP51811 444 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 OR4D2P58180 307 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 STX1BP61266 288 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 UFM1P61960 85 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 TLE3Q04726 772 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 PRSS53Q2L4Q9 553 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 PDCD4Q53EL6 469 aaKnown RBP20.27■□□□□ 0.84
NECAB3-221ENST00000607055 CCDC81Q6ZN84 652 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 R3HCC1LQ7Z5L2 792 aaKnown RBP20.27■□□□□ 0.84
NECAB3-221ENST00000607055 OR7A2PQ8NGA2 310 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 MTERF3Q96E29 417 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 SLC35C2Q9NQQ7 365 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 PNO1Q9NRX1 252 aaKnown RBP20.27■□□□□ 0.84
NECAB3-221ENST00000607055 GIMAP4Q9NUV9 329 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 SH3BP4Q9P0V3 963 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 ATP6V1HQ9UI12 483 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 ENTPD4Q9Y227 616 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 SSUH2Q9Y2M2 353 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 ZNF780BQ9Y6R6 833 aa20.27■□□□□ 0.84
NECAB3-221ENST00000607055 SRRM3A6NNA2 597 aaPredicted RBP20.26■□□□□ 0.83
NECAB3-221ENST00000607055 GABRR3A8MPY1 467 aa20.26■□□□□ 0.83
NECAB3-221ENST00000607055 PCDH17O14917 1159 aa20.26■□□□□ 0.83
NECAB3-221ENST00000607055 SNX3O60493 162 aa20.26■□□□□ 0.83
NECAB3-221ENST00000607055 ITPKBP27987 946 aa20.26■□□□□ 0.83
NECAB3-221ENST00000607055 FEN1P39748 380 aaKnown RBP20.26■□□□□ 0.83
NECAB3-221ENST00000607055 IGLV3-21P80748 117 aaPredicted RBP20.26■□□□□ 0.83
NECAB3-221ENST00000607055 PDE7AQ13946 482 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms