RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 CCT6BQ92526 530 aa13.05□□□□□ -0.32
HCG18-245ENST00000602550 SPACA9Q96E40 222 aaPredicted RBP13.05□□□□□ -0.32
HCG18-245ENST00000602550 JSRP1Q96MG2 331 aaPredicted RBP13.05□□□□□ -0.32
HCG18-245ENST00000602550 RUNDC3BQ96NL0 473 aa13.05□□□□□ -0.32
HCG18-245ENST00000602550 QRFPRQ96P65 431 aa13.05□□□□□ -0.32
HCG18-245ENST00000602550 SECISBP2Q96T21 854 aaKnown RBP13.05□□□□□ -0.32
HCG18-245ENST00000602550 PRDM14Q9GZV8 571 aa13.05□□□□□ -0.32
HCG18-245ENST00000602550 TSPY26PQ9H489 355 aa13.05□□□□□ -0.32
HCG18-245ENST00000602550 COPS7BQ9H9Q2 264 aaPredicted RBP13.05□□□□□ -0.32
HCG18-245ENST00000602550 XAB2Q9HCS7 855 aaKnown RBP13.05□□□□□ -0.32
HCG18-245ENST00000602550 IARS2Q9NSE4 1012 aaKnown RBP13.05□□□□□ -0.32
HCG18-245ENST00000602550 NDRG3Q9UGV2 375 aa13.05□□□□□ -0.32
HCG18-245ENST00000602550 ADAM21Q9UKJ8 722 aa13.05□□□□□ -0.32
HCG18-245ENST00000602550 SLC22A14Q9Y267 594 aa13.05□□□□□ -0.32
HCG18-245ENST00000602550 CAPN6Q9Y6Q1 641 aa13.05□□□□□ -0.32
HCG18-245ENST00000602550 MYOCOSA0A1B0GUC4 107 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 A0A1W2PPR1 153 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 SH3D21A4FU49 640 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 MBD3L4A6NDZ8 208 aaPredicted RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 MBD3L3A6NE82 208 aaPredicted RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 MBD3L5A6NJ08 208 aaPredicted RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 LRRC3CA6NJW4 275 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 KDM4EB2RXH2 506 aaPredicted RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 ERN1O75460 977 aaKnown RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 COX7A2P14406 83 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 GNAZP19086 355 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 FPR1P21462 350 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 GDF1P27539 372 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 SERPINB3P29508 390 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 HNRNPH1P31943 449 aaKnown RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 RPL21P46778 160 aaKnown RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 AGFG1P52594 562 aaKnown RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 PLA2G16P53816 162 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 MTTPP55157 894 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 TBCELQ5QJ74 424 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 YTHDF3Q7Z739 585 aaKnown RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 KRT78Q8N1N4 520 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 C2CD4AQ8NCU7 369 aaPredicted RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 MCUQ8NE86 351 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 MBD3L2Q8NHZ7 208 aaPredicted RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 ZNF721Q8TF20 911 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 CSF3RQ99062 836 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 DOHHQ9BU89 302 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 RBM24Q9BX46 236 aaKnown RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 REXO4Q9GZR2 422 aaKnown RBP13.04□□□□□ -0.32
HCG18-245ENST00000602550 CALHM2Q9HA72 323 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 HOMER3Q9NSC5 361 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 TRPS1Q9UHF7 1281 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 ROS1P08922 2347 aa13.04□□□□□ -0.32
HCG18-245ENST00000602550 ANKDD1BA6NHY2 528 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 DYRK3O43781 588 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 CLEC3AO75596 197 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 TRAPPC6AO75865 159 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 ETHE1O95571 254 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 C1GALT1C1LP0DN25 315 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 CDKN2DP55273 166 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 TGM3Q08188 693 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 GPS1Q13098 491 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 TRIP13Q15645 432 aaPredicted RBP13.03□□□□□ -0.32
HCG18-245ENST00000602550 ADPRMQ3LIE5 342 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 VASNQ6EMK4 673 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.03□□□□□ -0.32
HCG18-245ENST00000602550 FAM13CQ8NE31 585 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 NTNG2Q96CW9 530 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 ART5Q96L15 291 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 WDR83Q9BRX9 315 aaKnown RBP13.03□□□□□ -0.32
HCG18-245ENST00000602550 PITHD1Q9GZP4 211 aaPredicted RBP13.03□□□□□ -0.32
HCG18-245ENST00000602550 NT5DC2Q9H857 520 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 PROK2Q9HC23 129 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.03□□□□□ -0.32
HCG18-245ENST00000602550 CAMK2AQ9UQM7 478 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 CHCHD2Q9Y6H1 151 aaPredicted RBP13.03□□□□□ -0.32
HCG18-245ENST00000602550 IKBKGQ9Y6K9 419 aa13.03□□□□□ -0.32
HCG18-245ENST00000602550 ANKRD33BA6NCL7 494 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 LDB3O75112 727 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 FBXO45P0C2W1 286 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 TMIGD3P0DMS9 266 aaPredicted RBP13.02□□□□□ -0.33
HCG18-245ENST00000602550 CERS1P27544 350 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 CPA2P48052 419 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 VPS41P49754 854 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 BIKQ13323 160 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 RCAN2Q14206 197 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 RBM20Q5T481 1227 aaKnown RBP13.02□□□□□ -0.33
HCG18-245ENST00000602550 ANKRD22Q5VYY1 191 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 ABHD17CQ6PCB6 329 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 LYPD8Q6UX82 237 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 PDLIM5Q96HC4 596 aaKnown RBP13.02□□□□□ -0.33
HCG18-245ENST00000602550 SENP5Q96HI0 755 aaPredicted RBP13.02□□□□□ -0.33
HCG18-245ENST00000602550 ZNF597Q96LX8 424 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 ZFP3Q96NJ6 502 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 SERPINB12Q96P63 405 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 ROGDIQ9GZN7 287 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 LYRM4Q9HD34 91 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 SPACA6W5XKT8 324 aa13.02□□□□□ -0.33
HCG18-245ENST00000602550 MED12LQ86YW9 2145 aa13.01□□□□□ -0.33
HCG18-245ENST00000602550 MED12Q93074 2177 aa13.01□□□□□ -0.33
HCG18-245ENST00000602550 TRIM3O75382 744 aaPredicted RBP13.01□□□□□ -0.33
HCG18-245ENST00000602550 CRLF1O75462 422 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms