RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 DCLRE1BQ9H816 532 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 FGF21Q9NSA1 209 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 CUTCQ9NTM9 273 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 ACTR3BQ9P1U1 418 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 GMPR2Q9P2T1 348 aaKnown RBP16.98■□□□□ 0.31
VRK3-225ENST00000601912 EGFL7Q9UHF1 273 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 PCDHB3Q9Y5E6 796 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 SNX13Q9Y5W8 968 aa16.98■□□□□ 0.31
VRK3-225ENST00000601912 WASHC1A8K0Z3 465 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 CDX4O14627 284 aaPredicted RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 CHST10O43529 356 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 FOXS1O43638 330 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 FKBP6O75344 327 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 KRT75O95678 551 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 GPC1P35052 558 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 ERFP50548 548 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 SIM1P81133 766 aaPredicted RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 SHC2P98077 582 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 MAP7Q14244 749 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 YOD1Q5VVQ6 348 aaPredicted RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 ANGPTL8Q6UXH0 198 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 SERPINA11Q86U17 422 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 PROSER1Q86XN7 944 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 OR4K14Q8NGD5 310 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 OR1L3Q8NH93 324 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 TANKQ92844 425 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 CNRIP1Q96F85 164 aaPredicted RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 CCDC74BQ96LY2 380 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 CSF3RQ99062 836 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 NDC1Q9BTX1 674 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 EDEM2Q9BV94 578 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 GLIPR2Q9H4G4 154 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 RAD21L1Q9H4I0 556 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 TMEM9BQ9NQ34 198 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 ELOVL7A1L3X0 281 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 FAM220BPB1ANY3 271 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 H0YIG0 161 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 H3BMH7 237 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 CYR61O00622 381 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 NTN3O00634 580 aaPredicted RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 GSTA4O15217 222 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 MED26O95402 600 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 PSMG1O95456 288 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 NTRK1P04629 796 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 RNH1P13489 461 aaKnown RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 FEN1P39748 380 aaKnown RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 ARSFP54793 590 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 SPEM2Q0P670 501 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 CEBPEQ15744 281 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 CYP51A1Q16850 503 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 SPDYE7PQ495Y7 208 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 AAGABQ6PD74 315 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 SPATA24Q86W54 205 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 CCDC116Q8IYX3 515 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 PSMA8Q8TAA3 256 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 ZNF501Q96CX3 271 aaPredicted RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 MVB12AQ96EY5 273 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 MMABQ96EY8 250 aaPredicted RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 CXorf36Q9H7Y0 433 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 SEMA3GQ9NS98 782 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 MAGEL2Q9UJ55 1249 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 CDC14AQ9UNH5 594 aa16.97■□□□□ 0.31
VRK3-225ENST00000601912 MRPS33Q9Y291 106 aaKnown RBP16.97■□□□□ 0.31
VRK3-225ENST00000601912 BLACEA4D250 179 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 D6RAR5 112 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 C8orf89P0DMQ9 161 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 XKP51811 444 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 OR4D2P58180 307 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 AP2B1P63010 937 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 TCF15Q12870 199 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 COL9A2Q14055 689 aaPredicted RBP16.96■□□□□ 0.31
VRK3-225ENST00000601912 FXNQ16595 210 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 PHF19Q5T6S3 580 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 CYP2R1Q6VVX0 501 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 TTLL10Q6ZVT0 673 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 CALHM3Q86XJ0 350 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 CLEC4FQ8N1N0 589 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 RCBTB1Q8NDN9 531 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 PNPT1Q8TCS8 783 aaKnown RBP16.96■□□□□ 0.31
VRK3-225ENST00000601912 ATOH1Q92858 354 aaPredicted RBP16.96■□□□□ 0.31
VRK3-225ENST00000601912 REXO5Q96IC2 774 aaKnown RBP16.96■□□□□ 0.31
VRK3-225ENST00000601912 RSRC1Q96IZ7 334 aaKnown RBP16.96■□□□□ 0.31
VRK3-225ENST00000601912 LRFN3Q9BTN0 628 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 SPATA9Q9BWV2 254 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 SEMA4GQ9NTN9 838 aa16.96■□□□□ 0.31
VRK3-225ENST00000601912 SPTBP11277 2137 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 RNF103-CHMP3A0A140T963 221 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 ARPC2O15144 300 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 KRT36O76013 467 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 CD59P13987 128 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 ALAS2P22557 587 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 SOX11P35716 441 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 VAC14Q08AM6 782 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 TRA2AQ13595 282 aaKnown RBP eCLIP16.95■□□□□ 0.3
VRK3-225ENST00000601912 RGNQ15493 299 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 SNCBQ16143 134 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 GLYATQ6IB77 296 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 LCN8Q6JVE9 175 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 ERICH5Q6P6B1 374 aa16.95■□□□□ 0.3
VRK3-225ENST00000601912 MICU2Q8IYU8 434 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms