RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ALDH3A1P30838 453 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 STT3AP46977 705 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 KRT6CP48668 564 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 MLF1P58340 268 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 NAA20P61599 178 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 ARG2P78540 354 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 HMGCS1Q01581 520 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 STX4Q12846 297 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 TUBA3CQ13748 450 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 SERTAD2Q14140 314 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 MEP1AQ16819 746 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 KRT71Q3SY84 523 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 ABHD17BQ5VST6 288 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 TUBA3EQ6PEY2 450 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 CYP20A1Q6UW02 462 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 ZNF227Q86WZ6 799 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 CISD2Q8N5K1 135 aaKnown RBP14.67□□□□□ -0.06
RPS28-203ENST00000600659 SLC5A8Q8N695 610 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 C1orf52Q8N6N3 182 aaKnown RBP14.67□□□□□ -0.06
RPS28-203ENST00000600659 CCDC63Q8NA47 563 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 OR6Y1Q8NGX8 325 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 VMP1Q96GC9 406 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 SIGLEC12Q96PQ1 595 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 CDCP1Q9H5V8 836 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 PRM3Q9NNZ6 103 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 ASF1BQ9NVP2 202 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 STMN3Q9NZ72 180 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 VPS29Q9UBQ0 182 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 MID2Q9UJV3 735 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 CCL27Q9Y4X3 112 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 EXPH5Q8NEV8 1989 aa14.67□□□□□ -0.06
RPS28-203ENST00000600659 TRBV11-1A0A0K0K1C0 115 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 DYTNA2CJ06 578 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 GABRR3A8MPY1 467 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 HRKO00198 91 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 TRIM13O60858 407 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 IGKV3-11P04433 115 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 HMOX2P30519 316 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 BUD31P41223 144 aaPredicted RBP14.66□□□□□ -0.06
RPS28-203ENST00000600659 UQCRFS1P47985 274 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 CLCN2P51788 898 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 BEND6Q5SZJ8 279 aaPredicted RBP14.66□□□□□ -0.06
RPS28-203ENST00000600659 CES4AQ5XG92 561 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 RPUSD3Q6P087 351 aaKnown RBP14.66□□□□□ -0.06
RPS28-203ENST00000600659 SCIMPQ6UWF3 145 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 EXOC3L1Q86VI1 746 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 RPS19BP1Q86WX3 136 aaKnown RBP14.66□□□□□ -0.06
RPS28-203ENST00000600659 SLC2A12Q8TD20 617 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 ZNF721Q8TF20 911 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 TANKQ92844 425 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 TM4SF18Q96CE8 201 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 APIPQ96GX9 242 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 SHCBP1LQ9BZQ2 653 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 TRIM45Q9H8W5 580 aaPredicted RBP14.66□□□□□ -0.06
RPS28-203ENST00000600659 TEKT2Q9UIF3 430 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 CES1P1Q9UKY3 287 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 USP9XQ93008 2570 aaPredicted RBP14.66□□□□□ -0.06
RPS28-203ENST00000600659 TRAV17A0A0B4J275 112 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 ARHGAP10A1A4S6 786 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 C17orf105B2RV13 164 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 ULK1O75385 1050 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 NEURL1O76050 574 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 GPR75O95800 540 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 CLPSP04118 112 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 IFNA16P05015 189 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 CHRNGP07510 517 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 SERPINB3P29508 390 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 SOX18P35713 384 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 CD96P40200 585 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 TAS2R50P59544 299 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 SRSF1Q07955 248 aaKnown RBP eCLIP14.66□□□□□ -0.06
RPS28-203ENST00000600659 CCNYL2Q5T2Q4 361 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 NDUFAF5Q5TEU4 345 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 OR52E8Q6IFG1 317 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 PAGE2Q7Z2X7 111 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 TMEM132CQ8N3T6 1108 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 GBP7Q8N8V2 638 aaPredicted RBP14.66□□□□□ -0.06
RPS28-203ENST00000600659 MORN4Q8NDC4 146 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 OR1N1Q8NGS0 311 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 OR14A16Q8NHC5 309 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 PPWD1Q96BP3 646 aaKnown RBP14.66□□□□□ -0.06
RPS28-203ENST00000600659 ZBTB9Q96C00 473 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 TAAR6Q96RI8 345 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 SMC6Q96SB8 1091 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 HES7Q9BYE0 225 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 ANKRD10Q9NXR5 420 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 AHSPQ9NZD4 102 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 SENP1Q9P0U3 644 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 PTGDR2Q9Y5Y4 395 aa14.66□□□□□ -0.06
RPS28-203ENST00000600659 CCDC151A5D8V7 595 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 TCP11X1B4DZS4 312 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 H3BQF6 201 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 ZNF354AO60765 605 aaPredicted RBP14.65□□□□□ -0.06
RPS28-203ENST00000600659 ALOX15P16050 662 aaPredicted RBP14.65□□□□□ -0.06
RPS28-203ENST00000600659 TLX1P31314 330 aaPredicted RBP14.65□□□□□ -0.06
RPS28-203ENST00000600659 TRHRP34981 398 aaPredicted RBP14.65□□□□□ -0.06
RPS28-203ENST00000600659 MAPK12P53778 367 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 DUSP2Q05923 314 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 SPRED3Q2MJR0 410 aa14.65□□□□□ -0.06
RPS28-203ENST00000600659 CEP85LQ5SZL2 805 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms