RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 FAIM2Q9BWQ8 316 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 POT1Q9NUX5 634 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 PCDHGA2Q9Y5H1 932 aa16.13■□□□□ 0.17
SHKBP1-216ENST00000598201 A0A0J9YVX5 310 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 P2RX6O15547 441 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 PVRP15151 417 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 DDX5P17844 614 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 PIGAP37287 484 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 RPL5P46777 297 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 ARFIP1P53367 373 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 CDH15P55291 814 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 STXBP1P61764 594 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 BTN3A2P78410 334 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 DUSP2Q05923 314 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 SPDYE7PQ495Y7 208 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 CYP27C1Q4G0S4 372 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 FIGLAQ6QHK4 219 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 TSSK4Q6SA08 328 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 PSMA8Q8TAA3 256 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 TRAPPC9Q96Q05 1148 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 MAPKAP1Q9BPZ7 522 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 GRIP2Q9C0E4 1043 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 FAM192AQ9GZU8 254 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 SERHL2Q9H4I8 314 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 CLK4Q9HAZ1 481 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 PRMT8Q9NR22 394 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 FAM118AQ9NWS6 357 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 PRAMEF25A6NGN4 478 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 ZNF217O75362 1048 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 ERAL1O75616 437 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 OR6B1O95007 311 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 ZNF888P0CJ79 500 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 CTSEP14091 401 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 CCT3P49368 545 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 ITGA1P56199 1179 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 BIRC2Q13490 618 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 MLC1Q15049 377 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 CRB2Q5IJ48 1285 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 TMEM26Q6ZUK4 368 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 CYP4Z1Q86W10 505 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 DCP2Q8IU60 420 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 MAML2Q8IZL2 1156 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 ARL10Q8N8L6 244 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 SRFBP1Q8NEF9 429 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 NT5CQ8TCD5 201 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 ZFPM2Q8WW38 1151 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 RAB8BQ92930 207 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 TM4SF19Q96DZ7 209 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 CNRIP1Q96F85 164 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 RDH12Q96NR8 316 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 LRFN3Q9BTN0 628 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 YIPF3Q9GZM5 350 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 PILRAQ9UKJ1 303 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 CES1P1Q9UKY3 287 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 BAG5Q9UL15 447 aa16.12■□□□□ 0.17
SHKBP1-216ENST00000598201 LOC105369274A0A096LPK9 316 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 KIR2DS5A0A0G2JLQ3 304 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 A0A0G2JNG1 304 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 LOC102723532A0A0G2JNH3 316 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 KIR2DS3K7RE56 304 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 PROM1O43490 865 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 SH3BP5O60239 455 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 MITFO75030 526 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 WNT1P04628 370 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 PABPC4LP0CB38 370 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 ALPPL2P10696 532 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 OR1E2P47887 323 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 NCBP2P52298 156 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 PPP1CAP62136 330 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 CSTF1Q05048 431 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 KCNAB2Q13303 367 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 TP53BP2Q13625 1128 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 KIR2DS5Q14953 304 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 NADK2Q4G0N4 442 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 RPS26P11Q5JNZ5 115 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 FRMPD2BQ6IN97 320 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 PARGQ86W56 976 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 OR4N4Q8N0Y3 316 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 SUN3Q8TAQ9 357 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 SPPL2AQ8TCT8 520 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 UTP15Q8TED0 518 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 SLC38A5Q8WUX1 472 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 IFT80Q9P2H3 777 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 PADI2Q9Y2J8 665 aa16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 SAMHD1Q9Y3Z3 626 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 TDRD6O60522 2096 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-216ENST00000598201 C8orf89P0DMQ9 161 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 HOXA6P31267 233 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 DNAJA1P31689 397 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 POLR2IP36954 125 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 TSFMP43897 325 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 RGS1Q08116 209 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 MAPK11Q15759 364 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 SMYD1Q8NB12 490 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 GAL3ST3Q96A11 431 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 BBS4Q96RK4 519 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 LRRC61Q9BV99 259 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 GABARAPL1Q9H0R8 117 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 HRASLS2Q9NWW9 162 aa16.1■□□□□ 0.17
SHKBP1-216ENST00000598201 NDUFAF4Q9P032 175 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms