RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CASP9P55211 416 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 TAS2R50P59544 299 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 TBPL1P62380 186 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 MC1RQ01726 317 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 CHRNEQ04844 493 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 COX10Q12887 443 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 HEPACAMQ14CZ8 416 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 DUSP7Q16829 419 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 SLC35F1Q5T1Q4 408 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 VASH1Q7L8A9 365 aaPredicted RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 NOXA1Q86UR1 476 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 GATAD2AQ86YP4 633 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 RASGEF1AQ8N9B8 481 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 VANGL1Q8TAA9 524 aaPredicted RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 WDR48Q8TAF3 677 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 OR5P2Q8WZ92 322 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 MRPS31Q92665 395 aaKnown RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 SCAMP4Q969E2 229 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 TRMT61AQ96FX7 289 aaKnown RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 TMEM169Q96HH4 297 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 SLC6A18Q96N87 628 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 IL4I1Q96RQ9 567 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 TRAF4Q9BUZ4 470 aaPredicted RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 MARCH7Q9H992 704 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 MRPS18AQ9NVS2 196 aaKnown RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 TXNL4BQ9NX01 149 aaKnown RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 DNAJC27Q9NZQ0 273 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 CLEC2DQ9UHP7 191 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 PCNTO95613 3336 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 SH3BGRLO75368 114 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 GAAP10253 952 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 CKMT1AP12532 417 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 PTBP1P26599 531 aaKnown RBP eCLIP12.6□□□□□ -0.39
VRK3-209ENST00000594948 PREPP48147 710 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 DUSP6Q16828 381 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 TCTN1Q2MV58 587 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 ZNF284Q2VY69 593 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 CYP27C1Q4G0S4 372 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 ZNF658BQ4V348 819 aaPredicted RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 GPAT3Q53EU6 434 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 YIF1BQ5BJH7 314 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 ZMAT1Q5H9K5 638 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 TIGD3Q6B0B8 471 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 TCTN3Q6NUS6 607 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 PGBD2Q6P3X8 592 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 FAM131AQ6UXB0 335 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 GPR32P1Q8NGA4 272 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 OR5AK3PQ8NH89 298 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 AP3S1Q92572 193 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 GLYATL1Q969I3 302 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 ZC3HAV1LQ96H79 300 aaKnown RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 TMEM246Q9BRR3 403 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 RIOK2Q9BVS4 552 aaKnown RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 POLR2J3Q9H1A7 115 aaKnown RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 MIXL1Q9H2W2 232 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 PRM3Q9NNZ6 103 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 TBC1D14Q9P2M4 693 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 PLEKHB1Q9UF11 243 aaPredicted RBP12.6□□□□□ -0.39
VRK3-209ENST00000594948 KLHL20Q9Y2M5 609 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 PLXND1Q9Y4D7 1925 aa12.6□□□□□ -0.39
VRK3-209ENST00000594948 HEPACAM2A8MVW5 462 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 B4DXG7 233 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 BNIP3LO60238 219 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 HCN1O60741 890 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 GUCY1B2O75343 617 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 CYP7B1O75881 506 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 CDRT1O95170 752 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 HLA-DQB1P01920 261 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 URODP06132 367 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 CKMP06732 381 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 CSF3P09919 207 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 ELNP15502 786 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 HLA-FP30511 346 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 TM4SF4P48230 202 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 CTSCP53634 463 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 SEC23BQ15437 767 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 PRSS53Q2L4Q9 553 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 KLHL22Q53GT1 634 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 C3orf38Q5JPI3 329 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 DDI2Q5TDH0 399 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 METAP1DQ6UB28 335 aaPredicted RBP12.59□□□□□ -0.39
VRK3-209ENST00000594948 NXPE4Q6UWF7 544 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 CEACAM20Q6UY09 585 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 Q6ZVL8 140 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 TECPR1Q7Z6L1 1165 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 TCTE3Q8IZS6 198 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 ZNF557Q8N988 423 aaPredicted RBP12.59□□□□□ -0.39
VRK3-209ENST00000594948 CHST14Q8NCH0 376 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 SETD7Q8WTS6 366 aaKnown RBP12.59□□□□□ -0.39
VRK3-209ENST00000594948 SLC5A11Q8WWX8 675 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 ZNF764Q96H86 408 aaPredicted RBP12.59□□□□□ -0.39
VRK3-209ENST00000594948 ZNF354BQ96LW1 612 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 FRMD6Q96NE9 622 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 CXorf36Q9H7Y0 433 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 RNF121Q9H920 327 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 ABCB9Q9NP78 766 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 FGF20Q9NP95 211 aaPredicted RBP12.59□□□□□ -0.39
VRK3-209ENST00000594948 MIEF1Q9NQG6 463 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 TAAR2Q9P1P5 351 aa12.59□□□□□ -0.39
VRK3-209ENST00000594948 RHCGQ9UBD6 479 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms